ggKbase home page

13_1_40cm_3_scaffold_6972

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6972_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1..1488
DNA (1488bp) protein (496aa)
cGMP-dependent 3',5'-cyclic phosphodiesterase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q090R6_STIAD
metal-dependent phosphohydrolase Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
metal-dependent phosphohydrolase
13_1_40cm_3_scaffold_6972_2
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(1505..1717)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEW0_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_40cm_3_scaffold_6972_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(2078..2737)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEW1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41770.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_6972_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3326..3526)
DNA (201bp) protein (67aa)
lolD; lipoprotein-releasing system, ATP-binding protein lolD (EC:3.6.3.-); K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
lolD; lipoprotein-releasing system, ATP-binding protein lolD (EC:3.6.3.-)
Lipoprotein-releasing system, ATP-binding protein LolD n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEW2_9BACT
13_1_40cm_3_scaffold_6972_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3526..3951)
DNA (426bp) protein (142aa)
lolD; lipoprotein-releasing system, ATP-binding protein lolD (EC:3.6.3.-); K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
lolD; lipoprotein-releasing system, ATP-binding protein lolD (EC:3.6.3.-)
Lipoprotein-releasing system, ATP-binding protein LolD n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEW2_9BACT
13_1_40cm_3_scaffold_6972_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(4084..5370)
DNA (1287bp) protein (429aa)
Lipoprotein-releasing system, transmembrane protein LolC n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEW3_9BACT rbh
lolC; lipoprotein-releasing system, transmembrane protein lolC; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
lolC; lipoprotein-releasing system, transmembrane protein lolC
13_1_40cm_3_scaffold_6972_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(5370..6791)
DNA (1422bp) protein (474aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEW4_9BACT
13_1_40cm_3_scaffold_6972_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(6858..7949)
DNA (1092bp) protein (364aa)
Peptide chain release factor 2 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEW5_9BACT
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospiral
13_1_40cm_3_scaffold_6972_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8009..9595)
DNA (1587bp) protein (529aa)
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-); K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-)
Apolipoprotein N-acyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEW6_9BACT
13_1_40cm_3_scaffold_6972_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

9658..10089
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3V5_GEODF
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_6972_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10197..10451
DNA (255bp) protein (85aa)
Putative Thioredoxin n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEZ5_9BACT
putative thioredoxin Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative thioredoxin
13_1_40cm_3_scaffold_6972_12
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

10495..10659
DNA (165bp) protein (55aa)
Uncharacterized protein n=3 Tax=Leptospirillum RepID=J9ZAK6_LEPFM
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
13_1_40cm_3_scaffold_6972_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10735..13932
DNA (3198bp) protein (1066aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEZ6_9BACT rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_6972_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13957..14583
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEZ7_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
Displaying 14 items

View Taxonomy