ggKbase home page

13_1_40cm_3_scaffold_684

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_684_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1..2106
DNA (2106bp) protein (702aa)
putative soluble lytic murein transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Putative Soluble lytic murein transglycosylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7Q9_9BACT rbh
putative soluble lytic murein transglycosylase
13_1_40cm_3_scaffold_684_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

2178..2432
DNA (255bp) protein (85aa)
Putative Cell division protein ZapB n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7Q8_9BACT
putative cell division protein ZapB
Putative Cell division protein ZapB {ECO:0000313|EMBL:CBK43404.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_684_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2425..2721
DNA (297bp) protein (99aa)
Putative Cell division protein ZapA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7Q7_9BACT
putative cell division protein ZapA; K09888 cell division protein ZapA Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative cell division protein ZapA
13_1_40cm_3_scaffold_684_4
unknown

Not on your lists

comp(2600..3187)
DNA (588bp) protein (196aa)

This feature has no annotations

13_1_40cm_3_scaffold_684_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3685..4800
DNA (1116bp) protein (372aa)
2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.4.16); K06950 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.4.16)
Ribonuclease Y n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7Q5_9BACT
13_1_40cm_3_scaffold_684_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4819..5598
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7Q4_9BACT rbh
hypothetical protein; K09769 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_684_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5653..6996
DNA (1344bp) protein (448aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7Q3_9BACT rbh
13_1_40cm_3_scaffold_684_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7062..7319
DNA (258bp) protein (86aa)
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 small subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7Q2_9BACT
13_1_40cm_3_scaffold_684_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7377..8138
DNA (762bp) protein (254aa)
tly; hemolysin TlyA-family protein; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Hemolysin TlyA-family protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7Q1_9BACT
tly; hemolysin TlyA-family protein
13_1_40cm_3_scaffold_684_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

8211..9134
DNA (924bp) protein (308aa)
putative uDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative uDP-glucose 4-epimerase (EC:5.1.3.2)
Putative UDP-glucose 4-epimerase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7Q0_9BACT
13_1_40cm_3_scaffold_684_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(9182..9505)
DNA (324bp) protein (108aa)
putative thiosulfate sulfurtransferase GlpE (EC:2.8.1.1)
Putative Thiosulfate sulfurtransferase GlpE {ECO:0000313|EMBL:CBK43395.1}; EC=2.8.1.1 {ECO:0000313|EMBL:CBK43395.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitros
Putative Thiosulfate sulfurtransferase GlpE n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7P9_9BACT
13_1_40cm_3_scaffold_684_12
Tupaia chinensis, Tupaia, Scandentia, Mammalia, Chordata, Metazoa

Not on your lists

9870..10244
DNA (375bp) protein (125aa)
Reticulocyte-binding protein 2 like protein a n=1 Tax=Columba livia RepID=R7VR90_COLLI
Putative abhydrolase domain-containing protein {ECO:0000313|EMBL:ELW66261.1}; TaxID=246437 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglir
hypothetical protein
13_1_40cm_3_scaffold_684_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10237..10572
DNA (336bp) protein (112aa)
cutA; divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Uncharacterized protein involved in tolerance to divalent cations id=2244538 bin=GWB2_Proteobacteria_55_19 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
divalent-cation tolerance protein CutA
13_1_40cm_3_scaffold_684_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

10683..11663
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7P6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43392.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_684_15
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

11856..13544
DNA (1689bp) protein (563aa)
fhs; formate-tetrahydrofolate ligase (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
fhs; formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7P5_9BACT rbh
13_1_40cm_3_scaffold_684_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(13642..14502)
DNA (861bp) protein (287aa)
hflC; FtsH protease activity modulator HflC (EC:3.4.-.-); K04087 membrane protease subunit HflC [EC:3.4.-.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hflC; FtsH protease activity modulator HflC (EC:3.4.-.-)
Protein HflC n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7P4_9BACT
13_1_40cm_3_scaffold_684_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(14499..15542)
DNA (1044bp) protein (348aa)
hflK; FtsH protease activity modulator HflK; K04088 membrane protease subunit HflK [EC:3.4.-.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
FtsH protease activity modulator HflK n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7P3_9BACT
hflK; FtsH protease activity modulator HflK
13_1_40cm_3_scaffold_684_18
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(15621..16226)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P898_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_40cm_3_scaffold_684_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

16465..17955
DNA (1491bp) protein (497aa)
Putative TonB-dependent receptor n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHT3_9BACT
TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
TonB-dependent receptor
Displaying 19 items

View Taxonomy