ggKbase home page

13_1_40cm_3_scaffold_354_13

Organism: 13_1_40CM_3_Nitrospirae_62_11

partial RP 31 / 55 BSCG 28 / 51 ASCG 8 / 38
Location: 9437..10438

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B (EC:5.4.99.-); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 335.0
  • Bit_score: 393
  • Evalue 3.20e-106
truB; tRNA pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 322.0
  • Bit_score: 359
  • Evalue 1.00e-96
tRNA pseudouridine synthase B n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8G6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 322.0
  • Bit_score: 359
  • Evalue 3.60e-96
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1002
ATGGCAAGCACATCGGGCGTGAATGTCGCGGCAAGGCCTGTCGTCGGAGACGGCCTCCTCAACGTCAAGAAGGCGGCCGGGTGGACGTCGCACGATGTCGTGGCCAAGCTACGGAACCTCCTCCGGGGCCCCAGAGTCGGACACGCCGGCACGCTCGATCCGGCGGCCACCGGCGTCCTGCCGGTGCTGATCGGGCGGGGGACACGAATCGCCGCGTACCTGGTGGACTGGGACAAGGAGTATCGGGCGGTGTTGCGCCTGGGGGAAGCGACCGACACGCAGGACGCCACCGGGGCGGTCTTGTCGCGGTCCCCCACGGCTGGTCTGACCCAAGAAGCGATCCGGACCGTCATCGAGCGGTTCCGTGGACGGCTCACGCAGGTGCCGCCGATGTATTCGGCGGTGAAGGTGGGAGGAGTTCCGCTCTACAAAGTTGCGCGGGCGGGGCGAACCGTCGAGCGGGAACCGCGGGAGGTGACGATCCACGACATCGAGGTGCTCGGCATCGACGGCCGCGACGTCTCCCTGCGCGTGGTGTGCTCCAAGGGCACCTATGTCAGGACGCTCTGCGCGGATATCGGAGAGGCGCTGGGCGTGGGGGGGCACCTGTTGGCATTGGAGCGGAGGCGGGTCGGGCCGCTGACCATCGAGCGGGCGCTCACGATGGAGGACATCGGGTCGCGGCTCCTGCGCGGGCGATTGGCCGACGATGTGATGCCTCTCGACGAGGCGCTCGCCGCGTTGCCGGCCCTGGTCGTGGATGAAGCGACCTCGGGTCGGGTCCTGCACGGCGCGCCGGTTTCGAGCCGGACTGTGACGTGGGACGCGAGGGCCGGGATCTCCGGGGTTGCGGCCGGGCAGACGGTTCGGCTGAAAGATCCCAACGGGCGCCTGCTGGCGCTCGGGAAGGTTGGGGCAGCGGGCGTTGACCAGGGGGCTGTGGCGTCGGTGAGTGCCGCTGAACGCATGGTGTCAATCCTGAAAGTGTTGGTGGACGCGTAG
PROTEIN sequence
Length: 334
MASTSGVNVAARPVVGDGLLNVKKAAGWTSHDVVAKLRNLLRGPRVGHAGTLDPAATGVLPVLIGRGTRIAAYLVDWDKEYRAVLRLGEATDTQDATGAVLSRSPTAGLTQEAIRTVIERFRGRLTQVPPMYSAVKVGGVPLYKVARAGRTVEREPREVTIHDIEVLGIDGRDVSLRVVCSKGTYVRTLCADIGEALGVGGHLLALERRRVGPLTIERALTMEDIGSRLLRGRLADDVMPLDEALAALPALVVDEATSGRVLHGAPVSSRTVTWDARAGISGVAAGQTVRLKDPNGRLLALGKVGAAGVDQGAVASVSAAERMVSILKVLVDA*