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13_1_40cm_3_scaffold_1248

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1248_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2..499
DNA (498bp) protein (166aa)
TIM-barrel fold metal-dependent hydrolase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQC9_9BACT
amidohydrolase; K07047 Tax=RBG_16_Euryarchaeota_68_12_curated
amidohydrolase
13_1_40cm_3_scaffold_1248_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(509..1333)
DNA (825bp) protein (275aa)
Protein containing DUF1028 (Fragment) n=1 Tax=mine drainage metagenome RepID=T1ATL2_9ZZZZ
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
protein of unknown function DUF1028
13_1_40cm_3_scaffold_1248_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1419..2021
DNA (603bp) protein (201aa)
Marine sediment metagenome DNA, contig: S01H1_S40523 Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_1248_4

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2034..2420
DNA (387bp) protein (129aa)
Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B0BFP3_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAP47601.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_40cm_3_scaffold_1248_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2480..3232
DNA (753bp) protein (251aa)
Haloacid dehalogenase, type II Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_1248_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(3207..4262)
DNA (1056bp) protein (352aa)
tRNA splicing endonuclease (EC:3.1.27.9) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
tRNA splicing endonuclease (EC:3.1.27.9)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036229E2 rbh
13_1_40cm_3_scaffold_1248_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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4407..5348
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037599EB
putative transcriptional regulator Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_1248_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

5350..5958
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000369034B
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
unknown product
13_1_40cm_3_scaffold_1248_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(5955..9989)
DNA (4035bp) protein (1345aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_1248_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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10164..11249
DNA (1086bp) protein (362aa)
ATPase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5I9H9_ACIB4
ATPase Tax=RBG_16_Euryarchaeota_67_27_curated
ATPase
13_1_40cm_3_scaffold_1248_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11251..12150)
DNA (900bp) protein (300aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=RBG_16_Euryarchaeota_68_12_curated
Multi-sensor hybrid histidine kinase id=2650861 bin=GWF2_Methylomirabilis_70_14 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multi-sensor signal transduction histidine kinase
13_1_40cm_3_scaffold_1248_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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12287..12496
DNA (210bp) protein (70aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_1248_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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12540..12641
DNA (102bp) protein (34aa)
Uncharacterized protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_1248_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(12800..13057)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036F3EF4
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_1248_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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13414..15243
DNA (1830bp) protein (610aa)
CAAX amino terminal protease family protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8V9_9EURY
CAAX amino terminal protease family protein Tax=RBG_16_Euryarchaeota_68_12_curated
CAAX amino terminal protease family protein
13_1_40cm_3_scaffold_1248_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(15244..15579)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AH53_NATGS
hypothetical protein; K09736 hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_1248_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

15730..17217
DNA (1488bp) protein (496aa)
DNA polymerase II small subunit (EC:2.7.7.7) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA polymerase II small subunit (EC:2.7.7.7)
DNA polymerase D small subunit (DPS) n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T825_9EURY
13_1_40cm_3_scaffold_1248_18
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

Not on your lists

comp(17267..21193)
DNA (3927bp) protein (1309aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_62_10_curated
Putative uncharacterized protein id=3521809 bin=GWF2_Ignavibacteria_35_20 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
13_1_40cm_3_scaffold_1248_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

21348..22049
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5Z7L7_9CREN
metallophosphoesterase Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_3_scaffold_1248_20
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

22092..23099
DNA (1008bp) protein (336aa)
Signal peptidase I n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJD8_ACIS0
signal peptidase I Tax=RBG_16_Euryarchaeota_67_27_curated
signal peptidase I
13_1_40cm_3_scaffold_1248_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(23092..24324)
DNA (1233bp) protein (411aa)
ORC1-type DNA replication protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T4F2_9EURY rbh
cdc6; cell division control protein 6 Tax=RBG_16_Euryarchaeota_68_12_curated
cdc6; cell division control protein 6
13_1_40cm_3_scaffold_1248_22

Not on your lists

comp(24552..25334)
DNA (783bp) protein (261aa)
Uncharacterized protein {ECO:0000313|EMBL:AKA48870.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
ABC-3 protein id=2193194 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
ABC transporter permease
13_1_40cm_3_scaffold_1248_23
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(25349..26044)
DNA (696bp) protein (232aa)
ABC transporter ATP-binding protein; K09817 zinc transport system ATP-binding protein [EC:3.6.3.-] Tax=RBG_16_Thaumarchaeota_49_8_curated
Putative ABC transporter ATP-binding protein n=1 Tax=Legionella longbeachae serogroup 1 (strain NSW150) RepID=D3HLT8_LEGLN
ABC transporter ATP-binding protein
13_1_40cm_3_scaffold_1248_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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26147..26524
DNA (378bp) protein (126aa)
Putative nickel-responsive regulator n=1 Tax=Methanoculleus sp. CAG:1088 RepID=R7PY81_9EURY
nickel responsive regulator; K07722 CopG family transcriptional regulator, nickel-responsive regulator Tax=RBG_16_Euryarchaeota_68_12_curated
putative nickel-responsive regulator 2
Displaying 24 items

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