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13_1_40cm_3_scaffold_1293

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1293_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..107)
DNA (105bp) protein (35aa)
ArsR family transcriptional regulator Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_3_scaffold_1293_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(377..934)
DNA (558bp) protein (186aa)
Putative uncharacterized protein Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_3_scaffold_1293_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(931..1641)
DNA (711bp) protein (237aa)
Putative uncharacterized protein Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_3_scaffold_1293_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

1928..2137
DNA (210bp) protein (70aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_3_scaffold_1293_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

2180..3301
DNA (1122bp) protein (374aa)
Arabinose efflux permease family protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYZ0_METHD
arabinose efflux permease family protein Tax=RBG_16_Euryarchaeota_67_27_curated
arabinose efflux permease family protein
13_1_40cm_3_scaffold_1293_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3231..3680)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0LXR4_9EURY
DNA-binding protein; K06934 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA-binding protein
13_1_40cm_3_scaffold_1293_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3677..4666)
DNA (990bp) protein (330aa)
Putative exonuclease of the beta-lactamase fold involved in RNA processing n=1 Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P446_CYAGP
beta-lactamase domain-containing protein; K07577 putative mRNA 3-end processing factor Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_1293_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(4671..5063)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T4H5_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_3_scaffold_1293_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(5411..6223)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WSH9_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_1293_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6788..8110
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LMI9_THEBM
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_1293_11
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8192..13387
DNA (5196bp) protein (1732aa)
Putative protease n=1 Tax=Cellvibrio sp. BR RepID=I3I6E9_9GAMM
subtilisin-like serine protease Tax=RBG_16_Deltaproteobacteria_49_23_curated
copper-binding protein
13_1_40cm_3_scaffold_1293_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

13446..15398
DNA (1953bp) protein (651aa)
hbd-2; 3-hydroxyacyl-CoA dehydrogenase; K15016 3-hydroxybutyryl-CoA dehydratase / 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.55 1.1.1.35] Tax=RBG_16_Euryarchaeota_67_27_curated
enoyl-CoA hydratase (EC:4.2.1.17)
3-hydroxyacyl-CoA dehydrogenase 2/enoyl-CoA hydratase I 2 n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SR96_9BACT rbh
13_1_40cm_3_scaffold_1293_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(15405..15968)
DNA (564bp) protein (188aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CTB3_9FIRM
putative acyl-CoA transferase/carnitine dehydratase Tax=RBG_16_Euryarchaeota_68_12_curated
L-carnitine dehydratase/bile acid-inducible protein F
13_1_40cm_3_scaffold_1293_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(16621..18870)
DNA (2250bp) protein (750aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_1293_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

18964..20109
DNA (1146bp) protein (382aa)
Acetyl-CoA acetyltransferase n=2 Tax=Bacillus RepID=U5L8S8_9BACI
acetyl-CoA acetyltransferase Tax=RBG_16_Euryarchaeota_68_12_curated
acetyl-CoA acetyltransferase
13_1_40cm_3_scaffold_1293_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

20640..20981
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003672EEF
putative Na+-dependent transporter Tax=RBG_16_Euryarchaeota_68_12_curated
putative Na+-dependent transporter
13_1_40cm_3_scaffold_1293_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(21076..21387)
DNA (312bp) protein (104aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
UniRef90_G8U079 Butyryl-CoA dehydrogenase n=2 Tax=Sulfobacillus acidophilus RepID=G8U079_9FIRM id=1247820 bin=RBG9 species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG9 organism_group=Chloroflexi
acyl-CoA dehydrogenase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 17 items

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