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13_1_40cm_3_scaffold_12873

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_12873_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

52..429
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037ACFB5
acetolactate synthase small subunit Tax=RBG_16_Euryarchaeota_68_12_curated
ACT domain protein-containing protein
13_1_40cm_3_scaffold_12873_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(426..920)
DNA (495bp) protein (165aa)
Gp72 n=1 Tax=Mycobacterium abscessus subsp. bolletii BD RepID=H0IVC1_MYCAB
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
Holliday junction resolvase
13_1_40cm_3_scaffold_12873_3
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(998..2527)
DNA (1530bp) protein (510aa)
DEAD/DEAH box helicase n=1 Tax=Thermococcus zilligii RepID=UPI00029B5638
ERCC4-like helicase {ECO:0000313|EMBL:AKG91457.1}; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus ahangari.;"
Hef nuclease
13_1_40cm_3_scaffold_12873_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(2590..3123)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Nitrosopumilus sp. AR RepID=UPI0003634F2F
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_3_scaffold_12873_5
unknown

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comp(3183..3575)
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_40cm_3_scaffold_12873_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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3875..4351
DNA (477bp) protein (159aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RBG_16_Euryarchaeota_67_27_curated
Acetyl-CoA C-acetyltransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SS01_9BACT
Acetyl-CoA acetyltransferase
13_1_40cm_3_scaffold_12873_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4348..5472
DNA (1125bp) protein (375aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Acetyl-CoA C-acetyltransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SS00_9BACT
Acetyl-CoA acetyltransferase
13_1_40cm_3_scaffold_12873_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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5415..5960
DNA (546bp) protein (182aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRZ9_9BACT
putative nucleic-acid-binding protein containing a Zn-ribbon Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative nucleic-acid-binding protein containing a Zn-ribbon
13_1_40cm_3_scaffold_12873_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5957..6424
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2U5_FERPA
hypothetical protein; K07068 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_12873_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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6520..7065
DNA (546bp) protein (182aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
small GTP-binding protein
13_1_40cm_3_scaffold_12873_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7086..8804
DNA (1719bp) protein (573aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, N-terminal domain (Fragment) n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SIE1_9CHLR rbh
13_1_40cm_3_scaffold_12873_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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8815..9207
DNA (393bp) protein (131aa)
MmcF; methylmalonyl-CoA mutase C-terminal domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=RBG_16_Euryarchaeota_67_27_curated
Cobalamin B12-binding domain protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U782_OCEP5
cobalamin b12-binding domain protein
13_1_40cm_3_scaffold_12873_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9314..10282
DNA (969bp) protein (323aa)
argK2; lysine arginine ornithine transport system kinase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Lysine/arginine/ornithine transport system kinase n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YWV0_THEON
lysine/arginine/ornithine transport system kinase
13_1_40cm_3_scaffold_12873_trna_1
unknown

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comp(10157..10252)
DNA (96bp)
transferRNA
13_1_40cm_3_scaffold_12873_14
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(10325..11254)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000374592B
peptidylprolyl isomerase FKBP-type Tax=RBG_16_Euryarchaeota_67_27_curated
peptidylprolyl isomerase FKBP-type
13_1_40cm_3_scaffold_12873_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11327..12250)
DNA (924bp) protein (308aa)
Transcription initiation factor IIB n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YTY3_9EURY
Transcription initiation factor B Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Transcription initiation factor IIB (TFIIB)
13_1_40cm_3_scaffold_12873_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(12348..13091)
DNA (744bp) protein (248aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_12873_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(13093..13581)
DNA (489bp) protein (163aa)
hypothetical protein; K09129 hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein; K09129 hypothetical protein id=14425538 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
13_1_40cm_3_scaffold_12873_18
GWF2_CPR3_35_18, CPR3, Bacteria

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13717..14355
DNA (639bp) protein (213aa)
Laminin G, sub domain 2 id=3063494 bin=GWF2_CPR3_35_18 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_CPR3_35_18 organism_group=CPR3
Laminin G, sub domain 2 {ECO:0000313|EMBL:KKP70169.1}; TaxID=1618350 species="Bacteria; candidate division CPR3.;" source="candidate division CPR3 bacterium GW2011_GWF2_35_18.;"
laminin G, domain-containing 2
13_1_40cm_3_scaffold_12873_19
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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14442..14846
DNA (405bp) protein (135aa)
hypothetical protein Tax=GWB2_Ignavibacteria_35_6b_curated
Glycosyl hydrolase family 32 domain protein id=1775315 bin=GWA2_Ignavibacteria_55_11 species=Lachnospiraceae bacterium 3_1_57FAA_CT1 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Displaying 20 items

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