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13_1_40cm_3_scaffold_1342

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1342_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(106..609)
DNA (504bp) protein (168aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_1342_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(668..2110)
DNA (1443bp) protein (481aa)
Replication factor C large subunit n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TAB9_9EURY rbh
Replication factor C large subunit Tax=RBG_16_Euryarchaeota_68_12_curated
Replication factor C large subunit
13_1_40cm_3_scaffold_1342_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(2201..2341)
DNA (141bp) protein (47aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_1342_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(2495..3247)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003723D67
site-specific recombinase for integration and excision Tax=RBG_16_Euryarchaeota_68_12_curated
site-specific recombinase for integration and excision
13_1_40cm_3_scaffold_1342_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(3251..4126)
DNA (876bp) protein (292aa)
Site-specific recombinase, DNA invertase Pin n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VQ41_9EURY
site-specific recombinase for integration and excision Tax=RBG_16_Euryarchaeota_68_12_curated
site-specific recombinase for integration and excision
13_1_40cm_3_scaffold_1342_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(4376..5671)
DNA (1296bp) protein (432aa)
hmgA-1; hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.34 1.1.1.88); K00054 hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hydroxymethylglutaryl-CoA reductase (EC:1.1.1.88)
Hydroxymethylglutaryl-CoA reductase, degradative n=2 Tax=Archaeoglobus veneficus RepID=F2KML3_ARCVS
13_1_40cm_3_scaffold_1342_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(5731..6279)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFX6_ACIB4
fimbrial protein pilin Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_3_scaffold_1342_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(6645..7043)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035E644D
TM2 domain-containing protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_1342_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

7280..8644
DNA (1365bp) protein (455aa)
Hydrophobic amino acid ABC transporter (HAAT) family, periplasmic amino acid-binding protein n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JNB6_SYNJB
hydrophobic amino acid ABC transporter amino acid-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RBG_16_Euryarchaeota_68_13_curated
hydrophobic amino acid ABC transporter periplasmic amino acid-binding protein
13_1_40cm_3_scaffold_1342_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(8646..9497)
DNA (852bp) protein (284aa)
ABC transporter-like protein (EC:3.6.3.27); K11958 neutral amino acid transport system ATP-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
High-affinity branched-chain amino acid transport ATP-binding protein F n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKG1_HYPBU
high-affinity branched-chain amino acid transport ATP-binding protein F
13_1_40cm_3_scaffold_1342_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(9502..10284)
DNA (783bp) protein (261aa)
ABC transport system protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUB5_9BACT
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Euryarchaeota_68_13_curated
ABC transporter
13_1_40cm_3_scaffold_1342_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(10287..11219)
DNA (933bp) protein (311aa)
Inner-membrane translocator n=2 Tax=Thauera RepID=C4ZMW3_THASP
hydrophobic amino acid ABC transporter permease Tax=RBG_16_Euryarchaeota_68_13_curated
inner-membrane translocator
13_1_40cm_3_scaffold_1342_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11263..12291)
DNA (1029bp) protein (343aa)
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E1H0_9FIRM
hydrophobic amino acid ABC transporter permease Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hydrophobic amino acid ABC transporter permease
13_1_40cm_3_scaffold_1342_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(12459..17234)
DNA (4776bp) protein (1592aa)
Bacillopeptidase F n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B466_9BACI id=92598 bin=ACD61 species=Bacillus sp. NRRL B-14911 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD61 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_1342_15
unknown

Not on your lists

17294..17587
DNA (294bp) protein (98aa)

This feature has no annotations

Displaying 15 items

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