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13_1_40cm_3_scaffold_1486

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1486_1
unknown

Not on your lists

comp(1..819)
-----------------
DNA (819bp)
protein (273aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E542F9 rbh
13_1_40cm_3_scaffold_1486_trna_1
unknown

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comp(904..976)
-----------------
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_1486_2
unknown

Not on your lists

1051..1377
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

13_1_40cm_3_scaffold_1486_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1374..2207
-----------------
DNA (834bp)
protein (278aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037C4462
putative amidohydrolase Tax=RBG_16_Euryarchaeota_68_12_curated
putative amidohydrolase
13_1_40cm_3_scaffold_1486_4
unknown

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comp(2210..2764)
-----------------
DNA (555bp)
protein (185aa)

This feature has no annotations

13_1_40cm_3_scaffold_1486_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


2942..3313
-----------------
DNA (372bp)
protein (124aa)
50S ribosomal protein L7Ae n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TCL4_9EURY
rpl7ae; 50S ribosomal protein L7Ae Tax=RBG_16_Euryarchaeota_68_12_curated
rpl7ae; 50S ribosomal protein L7Ae
13_1_40cm_3_scaffold_1486_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


3326..3538
-----------------
DNA (213bp)
protein (71aa)
Ribosomal protein S28e n=1 Tax=mine drainage metagenome RepID=T1CGJ7_9ZZZZ
rps28e; 30S ribosomal protein S28e Tax=RBG_16_Euryarchaeota_68_12_curated
rps28e; 30S ribosomal protein S28e
13_1_40cm_3_scaffold_1486_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

3606..4157
-----------------
DNA (552bp)
protein (184aa)
ribosomal protein L24E Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_1486_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

4162..4617
-----------------
DNA (456bp)
protein (152aa)
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RBG_16_Euryarchaeota_68_12_curated
nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGY9_ARCPA
13_1_40cm_3_scaffold_1486_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

4676..6436
-----------------
DNA (1761bp)
protein (587aa)
Probable translation initiation factor IF-2 n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IDE8_ACIB4 rbh
translation initiation factor aIF-2; K03243 translation initiation factor 5B Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
translation initiation factor aIF-2
13_1_40cm_3_scaffold_1486_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

7431..7631
-----------------
DNA (201bp)
protein (67aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_1486_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

7589..8443
-----------------
DNA (855bp)
protein (285aa)
GCN5-related N-acetyltransferase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0A7_DYAFD
acyltransferase Tax=RBG_16_Euryarchaeota_68_12_curated
N-acetyltransferase GCN5
13_1_40cm_3_scaffold_1486_12
unknown

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comp(8492..8854)
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

13_1_40cm_3_scaffold_1486_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

8944..9273
-----------------
DNA (330bp)
protein (110aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_3_scaffold_1486_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

9344..10039
-----------------
DNA (696bp)
protein (232aa)
Circadian clock protein, KaiC n=1 Tax=mine drainage metagenome RepID=T1C6X0_9ZZZZ
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_16_Euryarchaeota_68_12_curated
RecA-superfamily ATPase possibly involved in signal transduction
13_1_40cm_3_scaffold_1486_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10036..11316)
-----------------
DNA (1281bp)
protein (427aa)
Membrane metalloprotease n=1 Tax=mine drainage metagenome RepID=T1AYU3_9ZZZZ
putative membrane-associated Zn-dependent protease Tax=RBG_16_Euryarchaeota_68_12_curated
putative membrane-associated Zn-dependent protease
13_1_40cm_3_scaffold_1486_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11400..11780)
-----------------
DNA (381bp)
protein (127aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D55A8
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_1486_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11888..12670)
-----------------
DNA (783bp)
protein (261aa)
MEMO1 family protein AciM339_1253 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HM58_ACIS0
putative dioxygenase Tax=RBG_16_Euryarchaeota_68_12_curated
putative dioxygenase
13_1_40cm_3_scaffold_1486_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(12680..13300)
-----------------
DNA (621bp)
protein (207aa)
30S ribosomal protein S2 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360F358
rps2P; 30S ribosomal protein S2 Tax=RBG_16_Euryarchaeota_68_12_curated
rps2P; 30S ribosomal protein S2
Displaying 19 items

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