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13_1_40cm_3_scaffold_1901

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1901_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2..541
DNA (540bp) protein (180aa)
SSU ribosomal protein S3AE n=1 Tax=Candidatus Methanomethylophilus alvus Mx1201 RepID=M9SKV4_9EURY
SSU ribosomal protein S3AE Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
SSU ribosomal protein S3AE
13_1_40cm_3_scaffold_1901_trna_1
unknown

Not on your lists

553..662
DNA (110bp)
transferRNA
13_1_40cm_3_scaffold_1901_2
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(668..1501)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Paenibacillus terrae (strain HPL-003) RepID=G7VTZ7_PAETH
hypothetical protein Tax=RBG_16_Elusimicrobia_66_12_curated
hypothetical protein
13_1_40cm_3_scaffold_1901_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1967..3436
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TKR6_9FIRM
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
general glycosylation pathway protein
13_1_40cm_3_scaffold_1901_4
unknown

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comp(3458..3997)
DNA (540bp) protein (180aa)

This feature has no annotations

13_1_40cm_3_scaffold_1901_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(4115..4501)
DNA (387bp) protein (129aa)
glutamate-1-semialdehyde aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-E04 RepID=UPI00036C85B8
glutamate-1-semialdehyde aminotransferase
13_1_40cm_3_scaffold_1901_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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4922..5509
DNA (588bp) protein (196aa)
aminobutyraldehyde dehydrogenase (EC:1.2.1.19)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000365F297
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_3_scaffold_1901_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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5484..6377
DNA (894bp) protein (298aa)
Aminobutyraldehyde dehydrogenase (EC:1.2.1.19 1.2.1.3)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI000371FB4A
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_3_scaffold_1901_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6453..7643
DNA (1191bp) protein (397aa)
Saccharopine dehydrogenase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HS96_CYAP4
saccharopine dehydrogenase Tax=RBG_16_Euryarchaeota_68_12_curated
saccharopine dehydrogenase
13_1_40cm_3_scaffold_1901_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

7718..8953
DNA (1236bp) protein (412aa)
4-aminobutyrate aminotransferase (EC:2.6.1.22) Tax=RBG_16_Euryarchaeota_67_27_curated
4-aminobutyrate aminotransferase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KW27_9FIRM
4-aminobutyrate aminotransferase
13_1_40cm_3_scaffold_1901_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(8963..10540)
DNA (1578bp) protein (526aa)
Aminotransferase class III n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TY43_9EURY
glutamate-1-semialdehyde aminotransferase Tax=RBG_16_Euryarchaeota_68_12_curated
glutamate-1-semialdehyde aminotransferase
13_1_40cm_3_scaffold_1901_11
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(10937..12301)
DNA (1365bp) protein (455aa)
succinate-semialdehyde dehydrogenase (NAD(P)(+)) (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] Tax=CG_Arma_01
succinate-semialdehyde dehydrogenase (NAD(P)(+)) (EC:1.2.1.16)
Succinate-semialdehyde dehydrogenase (NAD(P)(+)) n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK33_RHOMR
13_1_40cm_3_scaffold_1901_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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12416..12841
DNA (426bp) protein (142aa)
osmC; osmotically inducible protein C (EC:1.11.1.-); K04063 osmotically inducible protein OsmC Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Peroxiredoxin, OsmC subfamily n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DGQ4_9BURK
OsmC-like protein
13_1_40cm_3_scaffold_1901_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(12853..14163)
DNA (1311bp) protein (437aa)
FAD dependent oxidoreductase Tax=RBG_16_Euryarchaeota_68_12_curated
FAD dependent oxidoreductase id=14427105 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
FAD dependent oxidoreductase
13_1_40cm_3_scaffold_1901_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(14227..15018)
DNA (792bp) protein (264aa)
Malate/L-lactate dehydrogenase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEH6_THET1
malate/L-lactate dehydrogenase Tax=RBG_16_Euryarchaeota_68_12_curated
malate/L-lactate dehydrogenase
13_1_40cm_3_scaffold_1901_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(15427..17604)
DNA (2178bp) protein (726aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_1901_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

17774..18160
DNA (387bp) protein (129aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_1901_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(18177..19163)
DNA (987bp) protein (329aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_1901_18
unknown

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19432..19686
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_3_scaffold_1901_19

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comp(19687..20193)
DNA (507bp) protein (169aa)
Cytochrome oxidase assembly n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9V0_SPHTD
Xaa-Pro aminopeptidase (COX15) {ECO:0000313|EMBL:AIF19363.1}; TaxID=1456322 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_86_F11.;"
cytochrome oxidase assembly
13_1_40cm_3_scaffold_1901_20
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(20190..21896)
DNA (1707bp) protein (569aa)
cytochrome C oxidase subunit I n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI00030F157A
cytochrome c oxidase subunit I Tax=RBG_16_Euryarchaeota_68_13_curated
cytochrome c oxidase subunit I
13_1_40cm_3_scaffold_1901_21
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(21918..22238)
DNA (321bp) protein (107aa)
Caa(3)-type oxidase, subunit IV n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEB7_ANADF
caa(3)-type oxidase, subunit IV
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_3_scaffold_1901_22
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(22247..23422)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI0003758259
cytochrome C oxidase subunit I Tax=RBG_16_Euryarchaeota_68_13_curated
heme/copper-type cytochrome/quinol oxidase, subunit 1
13_1_40cm_3_scaffold_1901_23
Pyrobaculum sp. 1860, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

23541..24581
DNA (1041bp) protein (347aa)
Cytochrome C oxidase subunit II n=1 Tax=Pyrobaculum sp. 1860 RepID=G7VAH3_9CREN
cytochrome C oxidase subunit II
Cytochrome C oxidase subunit II {ECO:0000313|EMBL:AET32212.1}; TaxID=1104324 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum sp. 18
13_1_40cm_3_scaffold_1901_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

24658..25500
DNA (843bp) protein (281aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D860_9BACT
frdA; fumarate reductase flavoprotein subunit frdA
Displaying 25 items

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