ggKbase home page

13_1_40cm_3_scaffold_2013

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2013_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

1..1032
DNA (1032bp) protein (344aa)
peptidase M24; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C9FA3
hypothetical protein
13_1_40cm_3_scaffold_2013_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(1016..1570)
DNA (555bp) protein (185aa)
GCN5-related N-acetyltransferase n=1 Tax=uncultured prokaryote RepID=H5SCN9_9ZZZZ
GCN5-like N-acetyltransferase Tax=RBG_16_Euryarchaeota_68_13_curated
N-acetyltransferase GCN5
13_1_40cm_3_scaffold_2013_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

1918..4506
DNA (2589bp) protein (863aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000381145C
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
putative signal transduction protein
13_1_40cm_3_scaffold_2013_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

4558..5280
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380433D
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_16_Euryarchaeota_68_13_curated
circadian clock protein, KaiC
13_1_40cm_3_scaffold_2013_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(5277..6479)
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035E0E5B
ATP-dependent transcriptional regulator Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_3_scaffold_2013_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(6547..9312)
DNA (2766bp) protein (922aa)
Protein containing Collagen-binding surface protein Cna-like, B region n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RRL3_9PLAN
PKD domain-containing protein Tax=RBG_16_Euryarchaeota_68_13_curated
colA; microbial collagenase
13_1_40cm_3_scaffold_2013_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(9374..9742)
DNA (369bp) protein (123aa)
CBS-domain-containing membrane protein n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YLL1_9EURY
CBS-domain-containing membrane protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_3_scaffold_2013_8
unknown

Not on your lists

9754..9936
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_3_scaffold_2013_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

10564..10839
DNA (276bp) protein (92aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=RBG_16_Euryarchaeota_68_13_curated
Acylphosphatase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=ACYP_PELTS
AcyP; acylphosphatases
13_1_40cm_3_scaffold_2013_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(10880..11710)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037BF30C
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_3_scaffold_2013_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

11848..12546
DNA (699bp) protein (233aa)
circadian clock protein KaiC (EC:2.7.11.1)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380433D
circadian clock protein, KaiC Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_3_scaffold_2013_12
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12550..12936)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI000364D556
Polyketide cyclase/dehydrase
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
13_1_40cm_3_scaffold_2013_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(12933..13583)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000371F3A4
transcription factor Tax=RBG_16_Euryarchaeota_68_13_curated
transcription factor
13_1_40cm_3_scaffold_2013_14
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(13668..14426)
DNA (759bp) protein (253aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=uncultured delta proteobacterium RepID=Q2YZS9_9DELT
2-dehydropantoate 2-reductase Tax=RBG_16_Euryarchaeota_68_13_curated
Displaying 14 items

View Taxonomy