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13_1_40cm_3_scaffold_2345

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2345_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(2..928)
DNA (927bp) protein (309aa)
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_3_scaffold_2345_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(932..1708)
DNA (777bp) protein (259aa)
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RBG_16_Euryarchaeota_68_12_curated
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4P2_SPHTD
ABC transporter
13_1_40cm_3_scaffold_2345_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(1776..1976)
DNA (201bp) protein (67aa)
YHS domain protein n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MU35_PYRCJ
YHS domain protein
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_2345_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2056..3036
DNA (981bp) protein (327aa)
Putative dehydrogenase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HL08_ACIS0 rbh
putative dehydrogenase Tax=RBG_16_Euryarchaeota_68_12_curated
putative dehydrogenase
13_1_40cm_3_scaffold_2345_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(3096..4391)
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003645391 rbh
UDP-glucose/GDP-mannose dehydrogenase Tax=RBG_16_Euryarchaeota_68_12_curated
nucleotide sugar dehydrogenase
13_1_40cm_3_scaffold_2345_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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4536..5558
DNA (1023bp) protein (341aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14] Tax=RBG_16_Euryarchaeota_68_12_curated
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Caloramator australicus RC3 RepID=I7LK92_9CLOT
13_1_40cm_3_scaffold_2345_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(5538..6107)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000362BB31
methyltransferase related protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
methylase , hemK and PrmA related
13_1_40cm_3_scaffold_2345_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6159..7064
DNA (906bp) protein (302aa)
Rhomboid family protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T824_9EURY
rhomboid family protein Tax=RBG_16_Euryarchaeota_68_12_curated
rhomboid family protein
13_1_40cm_3_scaffold_2345_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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7106..7708
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003809A85
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_2345_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

7760..8449
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F6032
pheromone shutdown -like protein (traB) Tax=RBG_16_Euryarchaeota_68_12_curated
pheromone shutdown -like protein (traB)
13_1_40cm_3_scaffold_2345_11
unknown

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comp(8733..8966)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_3_scaffold_2345_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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9254..9700
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036B4CD4
putative DNA primase, eukaryotic-type, small subunit Tax=RBG_16_Euryarchaeota_67_27_curated
DNA primase, small subunit
13_1_40cm_3_scaffold_2345_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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9714..11876
DNA (2163bp) protein (721aa)
TPR repeat:TPR repeat n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C0T9_CROWT
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_2345_14
unknown

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comp(11908..12048)
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 14 items

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