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13_1_40cm_3_scaffold_275

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_275_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2..2272
DNA (2271bp) protein (757aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_275_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2286..2660)
DNA (375bp) protein (125aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LA92_HALJP
Arginyl-tRNA synthetase Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_275_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2657..3976)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000366B0B8
Arginyl-tRNA synthetase Tax=RBG_16_Euryarchaeota_68_12_curated
Arginyl-tRNA synthetase
13_1_40cm_3_scaffold_275_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3978..4385)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036CA000
peptide chain release factor 1; K03265 peptide chain release factor subunit 1 Tax=RBG_16_Euryarchaeota_68_12_curated
Eukaryotic peptide chain release factor subunit 1
13_1_40cm_3_scaffold_275_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(5368..5661)
DNA (294bp) protein (98aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_275_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(5777..5986)
DNA (210bp) protein (70aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_275_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6030..6788
DNA (759bp) protein (253aa)
Putative uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase) n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T599_9EURY
putative uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase) Tax=RBG_16_Euryarchaeota_68_12_curated
putative uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase)
13_1_40cm_3_scaffold_275_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

6799..7188
DNA (390bp) protein (130aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_275_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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7193..7744
DNA (552bp) protein (184aa)
LigT; 2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037365A0
LigT; 2'-5' RNA ligase
13_1_40cm_3_scaffold_275_10
unknown

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comp(7741..8397)
DNA (657bp) protein (219aa)

This feature has no annotations

13_1_40cm_3_scaffold_275_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(8405..8854)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TAI6_ACIB4
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_275_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

9000..10256
DNA (1257bp) protein (419aa)
thiD; phosphomethylpyrimidine kinase (EC:2.7.4.7); K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=RBG_16_Euryarchaeota_68_12_curated
thiD; phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9UZQ6_PYRAB
13_1_40cm_3_scaffold_275_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

10553..11413
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036C546F
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_275_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11455..12759
DNA (1305bp) protein (435aa)
Amine oxidase n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GGN9_METPE
amine oxidase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
amine oxidase
13_1_40cm_3_scaffold_275_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

12756..13460
DNA (705bp) protein (235aa)
Glycosyl transferase n=1 Tax=uncultured archaeon GZfos35A2 RepID=Q649I4_9ARCH
glycosyl transferase family protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_275_16
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(13457..14008)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000369BD15
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_3_scaffold_275_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(14090..15004)
DNA (915bp) protein (305aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFH6_ACIB4
FKBP-type peptidyl-prolyl cis-trans isomerase Tax=RBG_16_Euryarchaeota_68_12_curated
FKBP-type peptidyl-prolyl cis-trans isomerase
13_1_40cm_3_scaffold_275_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(15303..16511)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036840DE
proteasome-activating nucleotidase Tax=RBG_16_Euryarchaeota_68_13_curated
proteasome-activating nucleotidase
13_1_40cm_3_scaffold_275_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

16588..17088
DNA (501bp) protein (167aa)
Helix-turn-helix domain protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8S4_9EURY
helix-turn-helix domain protein Tax=RBG_16_Euryarchaeota_67_27_curated
helix-turn-helix domain protein
13_1_40cm_3_scaffold_275_20
unknown

Not on your lists

17085..17351
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_3_scaffold_275_21
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(17343..17807)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003601847
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_3_scaffold_275_22
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

Not on your lists

comp(17804..18583)
DNA (780bp) protein (260aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YCY7_9ZZZZ
Tax=RBG_13_Euryarchaeota_57_23_curated
13_1_40cm_3_scaffold_275_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(18580..26082)
DNA (7503bp) protein (2501aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
Putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshQ (Pilus type IV) id=4278837 bin=GWA2_Methylomirabilis_73_35 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_3_scaffold_275_24
unknown

Not on your lists

comp(26084..26326)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_3_scaffold_275_25
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(26893..28335)
DNA (1443bp) protein (481aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_3_scaffold_275_26
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(28421..29611)
DNA (1191bp) protein (397aa)
putative cell wall surface anchor family protein
Putative cell wall surface anchor family protein {ECO:0000313|EMBL:AIC14283.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;"
Displaying 26 items

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