ggKbase home page

13_1_40cm_3_scaffold_2830

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2830_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

2..1132
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003819C5D
Carbamoyl-phosphate synthase large chain Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Carbamoyl-phosphate synthase large chain
13_1_40cm_3_scaffold_2830_2
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

Not on your lists

1160..1603
DNA (444bp) protein (148aa)
Tax=RBG_16_Euryarchaeota_62_10_curated
13_1_40cm_3_scaffold_2830_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

1654..2601
DNA (948bp) protein (316aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=RBG_16_Euryarchaeota_67_27_curated
Phosphoglycerate dehydrogenase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67TJ9_SYMTH
D-3-phosphoglycerate dehydrogenase
13_1_40cm_3_scaffold_2830_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(2592..2795)
DNA (204bp) protein (68aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_2830_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(2792..3364)
DNA (573bp) protein (191aa)
GMP synthase subunit A (EC:6.3.5.2) Tax=RBG_16_Euryarchaeota_68_13_curated
GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC:6.3.5.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000379ADE2
13_1_40cm_3_scaffold_2830_6
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3458..4354
DNA (897bp) protein (299aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1402966 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Myc
Putative uncharacterized protein n=3 Tax=unclassified Coccolithovirus RepID=G4YD54_9PHYC
ATPase
13_1_40cm_3_scaffold_2830_7
unknown

Not on your lists

4367..5323
DNA (957bp) protein (319aa)

This feature has no annotations

13_1_40cm_3_scaffold_2830_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(5327..6274)
DNA (948bp) protein (316aa)
GMP synthase subunit B (EC:6.3.5.2) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC:6.3.5.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035E1670 rbh
13_1_40cm_3_scaffold_2830_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(6276..6746)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000364C5DE
phosphoribosylaminoimidazole carboxylase catalytic subunit Tax=RBG_16_Euryarchaeota_68_12_curated
phosphoribosylaminoimidazole carboxylase catalytic subunit
13_1_40cm_3_scaffold_2830_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(6808..7122)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T463_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_2830_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(7136..7369)
DNA (234bp) protein (78aa)
AsnC family transcriptional regulator n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003794C7E
transcriptional regulator Tax=RBG_16_Euryarchaeota_68_13_curated
transcriptional regulator
13_1_40cm_3_scaffold_2830_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(7462..8382)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036606CE
Sugar kinase, ribokinase family protein Tax=RBG_16_Euryarchaeota_68_12_curated
Sugar kinase, ribokinase family protein
13_1_40cm_3_scaffold_2830_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(8373..8480)
DNA (108bp) protein (36aa)
mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX (EC:3.1.3.87) Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 13 items

View Taxonomy