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13_1_40cm_3_scaffold_30350

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_30350_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(1..345)
DNA (345bp) protein (115aa)
Geranylgeranyl reductase family protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WKL9_9EURY
geranylgeranyl reductase family protein Tax=RBG_16_Euryarchaeota_68_12_curated
geranylgeranyl reductase
13_1_40cm_3_scaffold_30350_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(392..1195)
DNA (804bp) protein (268aa)
Sugar-specific transcriptional regulator TrmB family n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFH4_ACIB4
putative transcriptional regulator Tax=RBG_16_Euryarchaeota_68_12_curated
transcriptional regulator, TrmB
13_1_40cm_3_scaffold_30350_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1250..3706
DNA (2457bp) protein (819aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000381145C
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_30350_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(3703..4368)
DNA (666bp) protein (222aa)
aromatic acid decarboxylase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] Tax=RBG_16_Euryarchaeota_68_12_curated
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q97BJ5_THEVO
aromatic acid decarboxylase
13_1_40cm_3_scaffold_30350_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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4519..4800
DNA (282bp) protein (94aa)
30S ribosomal protein S19e n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HKS5_ACIS0
ribosomal protein S19E (S16A) Tax=RBG_16_Euryarchaeota_68_12_curated
ribosomal protein S19E (S16A)
13_1_40cm_3_scaffold_30350_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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4800..5135
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003714F93
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
DNA-binding protein
13_1_40cm_3_scaffold_30350_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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5299..5571
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003601E0A
ribosomal protein L31e Tax=RBG_16_Euryarchaeota_68_12_curated
LSU ribosomal protein L31E
13_1_40cm_3_scaffold_30350_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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5537..6238
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000374FB15
putative translation initiation factor eIF-6 Tax=RBG_16_Euryarchaeota_68_12_curated
translation initiation factor IF-6
13_1_40cm_3_scaffold_30350_9
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6245..7069)
DNA (825bp) protein (275aa)
Sporulation protein {ECO:0000313|EMBL:KGH06190.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudo
13_1_40cm_3_scaffold_30350_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

7159..7686
DNA (528bp) protein (176aa)
Putative membrane protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMW3_ACIS0
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_30350_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

7671..8198
DNA (528bp) protein (176aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_30350_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8215..8862
DNA (648bp) protein (216aa)
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZD2_METBU
hypothetical protein; K07142 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_30350_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(8873..10066)
DNA (1194bp) protein (398aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] Tax=RBG_16_Euryarchaeota_68_12_curated
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003823144
Displaying 13 items

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