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13_1_40cm_3_scaffold_3289

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3289_1
unknown

Not on your lists

comp(393..578)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_3_scaffold_3289_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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650..2062
DNA (1413bp) protein (471aa)
DNA topoisomerase I (EC:5.99.1.2) Tax=RBG_16_Euryarchaeota_68_12_curated
DNA topoisomerase I (EC:5.99.1.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DF512
13_1_40cm_3_scaffold_3289_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(2075..2329)
DNA (255bp) protein (85aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3289_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(2411..2650)
DNA (240bp) protein (80aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3289_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(2770..3132)
DNA (363bp) protein (121aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_3_scaffold_3289_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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3265..4323
DNA (1059bp) protein (353aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3289_7
unknown

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comp(4335..4673)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_3_scaffold_3289_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(4711..5880)
DNA (1170bp) protein (390aa)
Saccharopine dehydrogenase n=2 Tax=uncultured Chloroflexi bacterium RepID=H5SM32_9CHLR
saccharopine dehydrogenase family protein Tax=RBG_16_Euryarchaeota_68_12_curated
saccharopine dehydrogenase family protein
13_1_40cm_3_scaffold_3289_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6000..7640
DNA (1641bp) protein (547aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000310E7A5
type 11 methyltransferase Tax=RBG_16_Euryarchaeota_68_12_curated
type 11 methyltransferase
13_1_40cm_3_scaffold_3289_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(7637..8377)
DNA (741bp) protein (247aa)
KLTH0G16676p; K01090 protein phosphatase [EC:3.1.3.16] Tax=RBG_16_Euryarchaeota_68_12_curated
protein phosphatase 1K, mitochondrial precursor (EC:3.1.3.16)
Protein phosphatase 2C catalytic subunit id=2412326 bin=GWD1_TM7_39_7 species=Ichthyophthirius multifiliis genus=Ichthyophthirius taxon_order=Hymenostomatida taxon_class=Oligohymenophorea phylum=unknown tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
13_1_40cm_3_scaffold_3289_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8523..10502
DNA (1980bp) protein (660aa)
hypothetical protein id=24547291 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
probable cell surface glycoprotein
Probable cell surface glycoprotein {ECO:0000313|EMBL:CCQ36807.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas mo
13_1_40cm_3_scaffold_3289_12
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(10597..11388)
DNA (792bp) protein (264aa)
Transcriptional regulator, TrmB n=1 Tax=Ferroplasma sp. Type II RepID=T0NAB0_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EQB70665.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" s
transcriptional regulator TrmB
13_1_40cm_3_scaffold_3289_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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11451..11978
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XN52_SORCE
methyltransferase type 11 Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
Displaying 13 items

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