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13_1_40cm_3_scaffold_39870

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_39870_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2..307)
DNA (306bp) protein (102aa)
egsA; NAD(P)-dependent glycerol-1-phosphate dehydrogenase (EC:1.1.1.261); K00096 glycerol-1-phosphate dehydrogenase [NAD(P)] [EC:1.1.1.261] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Glycerol-1-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Methanoregula boonei (strain 6A8) RepID=G1PDH_METB6
egsA; NAD(P)-dependent glycerol-1-phosphate dehydrogenase
13_1_40cm_3_scaffold_39870_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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442..2145
DNA (1704bp) protein (568aa)
dppA; peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
dppA; peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein id=24578969 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Archaeoglobus fulgidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
dppA; peptide ABC transporter substrate-binding protein
13_1_40cm_3_scaffold_39870_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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2715..3179
DNA (465bp) protein (155aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YYZ3_DACSA
permease of oligopeptide ABC transporter; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_67_27_curated
dipeptide/oligopeptide/nickel ABC transporter permease
13_1_40cm_3_scaffold_39870_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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3285..4544
DNA (1260bp) protein (420aa)
ABC transporter; K02034 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_67_27_curated
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein id=24578967 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermosipho melanesiensis genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ABC transporter
13_1_40cm_3_scaffold_39870_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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4541..5488
DNA (948bp) protein (316aa)
oppD; oligopeptide ABC transporter ATP-binding protein id=24578966 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Actinopolymorpha alba genus=Actinopolymorpha taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
oppD; oligopeptide ABC transporter ATP-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_3_scaffold_39870_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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5611..6705
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003785E1B
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_16_Euryarchaeota_68_13_curated
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_3_scaffold_39870_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6731..8650
DNA (1920bp) protein (640aa)
Chromosome undetermined scaffold_80, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0E6V5_PARTE
hypothetical protein; K12600 superkiller protein 3 Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
Displaying 7 items

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