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13_1_40cm_3_scaffold_4131

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_4131_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

90..518
DNA (429bp) protein (143aa)
Predicted transcriptional regulator n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BN43_HYPBU
transcriptional regulator Tax=RBG_16_Euryarchaeota_68_12_curated
transcriptional regulator
13_1_40cm_3_scaffold_4131_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(511..1434)
DNA (924bp) protein (308aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_4131_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1490..2005)
DNA (516bp) protein (172aa)
hypothetical protein; K07254 tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] Tax=RBG_16_Euryarchaeota_68_12_curated
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HI67_ACIS0
hypothetical protein
13_1_40cm_3_scaffold_4131_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2012..2557)
DNA (546bp) protein (182aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_4131_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2561..3058)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003812A59
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_4131_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3193..3504)
DNA (312bp) protein (104aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_4131_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

3640..3933
DNA (294bp) protein (98aa)
single-stranded DNA-binding replication protein A, large (70 kD) subunit; K07466 replication factor A1 Tax=RBG_16_Euryarchaeota_68_12_curated
replication factor A1
single-stranded DNA-binding protein; K07466 replication factor A1 id=5241180 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_1_40cm_3_scaffold_4131_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3925..4509)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036A149E
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_4131_9
unknown

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4668..4943
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_3_scaffold_4131_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

4940..5377
DNA (438bp) protein (146aa)
arsenate reductase (EC:1.20.4.1) Tax=RBG_16_Euryarchaeota_68_12_curated
arsenate reductase (EC:1.20.4.1)
Arsenate reductase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK34_NITGG
13_1_40cm_3_scaffold_4131_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

5393..6292
DNA (900bp) protein (300aa)
L-asparaginase (EC:3.5.1.1)
Putative L-asparaginase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GWH2_SORC5
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_4131_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

6345..6653
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037D95B9
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_4131_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

6752..7513
DNA (762bp) protein (254aa)
ABC transporter related protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHW4_THET1
ABC transporter-like protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RBG_16_Euryarchaeota_68_12_curated
ABC transporter
13_1_40cm_3_scaffold_4131_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7830..9002
DNA (1173bp) protein (391aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_4131_trna_1
unknown

Not on your lists

9044..9117
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_4131_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(9221..9781)
DNA (561bp) protein (187aa)
Chaperone protein DnaJ n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L9L7_9CYAN
chaperone protein DnaJ Tax=RBG_16_Euryarchaeota_68_12_curated
chaperone DnaJ domain-containing protein
13_1_40cm_3_scaffold_4131_16
unknown

Not on your lists

comp(9879..10619)
DNA (741bp) protein (247aa)

This feature has no annotations

13_1_40cm_3_scaffold_4131_trna_2
unknown

Not on your lists

10796..10869
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_4131_17

Not on your lists

10889..11425
DNA (537bp) protein (179aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:EQD74621.1}; EC=1.4.-.- {ECO:0000313|EMBL:EQD74621.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecolo
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=mine drainage metagenome RepID=T1BP86_9ZZZZ
13_1_40cm_3_scaffold_4131_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

11489..13846
DNA (2358bp) protein (786aa)
hypothetical protein, partial n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003718DFD
putative ATP-dependent helicase Tax=RBG_16_Euryarchaeota_68_12_curated
putative ATP-dependent helicase
Displaying 20 items

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