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13_1_40cm_3_scaffold_4272

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_4272_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(39..1892)
DNA (1854bp) protein (618aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
rci:RCIX2726 hypothetical protein id=1241642 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hypothetical protein
13_1_40cm_3_scaffold_4272_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2034..2705
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000363E2B6
hypothetical protein; K06927 Tax=RBG_16_Euryarchaeota_68_12_curated
ATP-binding region
13_1_40cm_3_scaffold_4272_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2677..3183)
DNA (507bp) protein (169aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein Bm3-1_04649 id=4449776 bin=GWC2_Chloroflexi_73_18 species=Bacillus sp. m3-13 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_3_scaffold_4272_trna_1
unknown

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comp(3209..3303)
DNA (95bp)
transferRNA
13_1_40cm_3_scaffold_4272_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

3486..3782
DNA (297bp) protein (99aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_4272_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3998..4963)
DNA (966bp) protein (322aa)
galE-5; Nucleoside-diphosphate-sugar epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RBG_16_Euryarchaeota_68_12_curated
galE-5; Nucleoside-diphosphate-sugar epimerase (EC:5.1.3.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035D7D20
13_1_40cm_3_scaffold_4272_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(4950..5624)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CSV4_METMJ
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_4272_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(5621..5914)
DNA (294bp) protein (98aa)
putative deoxyribonucleotide triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RBG_16_Euryarchaeota_68_12_curated
Non-canonical purine NTP pyrophosphatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNM8_NIAKG
nucleoside-triphosphatase rdgB
13_1_40cm_3_scaffold_4272_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(5911..6129)
DNA (219bp) protein (73aa)
putative deoxyribonucleotide triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RBG_16_Euryarchaeota_68_12_curated
Non-canonical purine NTP pyrophosphatase n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=NTPA_PYRHO
Suspect SCG annotation. See neighboring gene [13_1_40cm_3_scaffold_4272_7].
deoxyribonucleotide triphosphate pyrophosphatase
13_1_40cm_3_scaffold_4272_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(6126..6734)
DNA (609bp) protein (203aa)
Mn2+-dependent serine/threonine protein kinase (EC:2.7.11.1)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037E55C1
O-sialoglycoprotein endopeptidase Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_4272_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(6725..8674)
DNA (1950bp) protein (650aa)
Putative helicase n=1 Tax=uncultured archaeon RepID=D1JIC7_9ARCH
DNA helicase, DEAD_2 domain-containing protein Tax=RBG_16_Euryarchaeota_68_12_curated
ATP dependent helicase
13_1_40cm_3_scaffold_4272_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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8891..9619
DNA (729bp) protein (243aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_4272_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

9670..10401
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037A6C01
peptidase M50 Tax=RBG_16_Euryarchaeota_68_12_curated
peptidase M50
13_1_40cm_3_scaffold_4272_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10398..11144)
DNA (747bp) protein (249aa)
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; K06898 Tax=RBG_16_Euryarchaeota_68_12_curated
NCAIR mutase-like protein; K06898 id=14625900 bin=bin7_NC10_sister species=Clostridium sp. BNL1100 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_3_scaffold_4272_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11158..12450)
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036404AA
bifunctional hexulose-6-phosphate synthase/ribonuclease regulator Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Orotidine 5'-phosphate decarboxylase
13_1_40cm_3_scaffold_4272_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

12608..13069
DNA (462bp) protein (154aa)
circadian clock protein, KaiC (EC:2.7.11.1) Tax=RBG_16_Euryarchaeota_68_12_curated
circadian clock protein, KaiC (EC:2.7.11.1)
KaiC domain protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5I9K2_ACIB4
13_1_40cm_3_scaffold_4272_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

13063..13338
DNA (276bp) protein (92aa)
circadian clock protein, KaiC (EC:2.7.11.1) Tax=RBG_16_Euryarchaeota_68_12_curated
RecA-superfamily ATPase possibly involved in signal transduction n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMG8_ACIS0
RecA-superfamily ATPase possibly involved in signal transduction
13_1_40cm_3_scaffold_4272_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

13343..13714
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5I9K3_ACIB4
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
Displaying 18 items

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