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13_1_40cm_3_scaffold_5296

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5296_trna_1
unknown

Not on your lists

128..235
DNA (108bp)
transferRNA
13_1_40cm_3_scaffold_5296_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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306..845
DNA (540bp) protein (180aa)
hypothetical protein; K09164 hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Protein of unknown function (DUF1684) id=14627918 bin=bin7_NC10_sister species=Halobiforma lacisalsi genus=Halobiforma taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_3_scaffold_5296_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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884..1210
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJI1_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_5296_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(1367..1624)
DNA (258bp) protein (86aa)
Translation elongation factor-like protein n=5 Tax=Dehalococcoides mccartyi RepID=D2BID7_DEHSV
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
elongation factor Tu, domain 2
13_1_40cm_3_scaffold_5296_4
unknown

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comp(1670..2029)
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_40cm_3_scaffold_5296_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2124..2339
DNA (216bp) protein (72aa)
Small nuclear ribonucleoprotein n=2 Tax=Methanomassiliicoccus RepID=U5Q212_9EURY
Like-Sm ribonucleoprotein core; K04796 small nuclear ribonucleoprotein Tax=RBG_16_Euryarchaeota_68_12_curated
Like-Sm ribonucleoprotein core
13_1_40cm_3_scaffold_5296_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

2380..3393
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036033DF
nucleotidyltransferase Tax=RBG_16_Euryarchaeota_67_27_curated
nucleotidyltransferase
13_1_40cm_3_scaffold_5296_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

3390..4739
DNA (1350bp) protein (450aa)
bifunctional phosphomannomutase/phosphoglucomutase (EC:5.4.2.8) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Phosphoglucosamine mutase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMZ8_ACIS0 rbh
phosphoglucosamine mutase
13_1_40cm_3_scaffold_5296_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(4732..5568)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003766F4D
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_3_scaffold_5296_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(5559..6437)
DNA (879bp) protein (293aa)
Flap endonuclease 1 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMZ0_ACIS0
flap structure-specific endonuclease Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
flap structure-specific endonuclease
13_1_40cm_3_scaffold_5296_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6562..8253)
DNA (1692bp) protein (564aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037EC543
13_1_40cm_3_scaffold_5296_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(8202..12707)
DNA (4506bp) protein (1502aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003732D5E
OmpA/MotB domain-containing protein
Displaying 12 items

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