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13_1_40cm_3_scaffold_462

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_462_1
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

2..487
DNA (486bp) protein (162aa)
hypothetical protein Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein id=14633044 bin=bin9_gal15 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_3_scaffold_462_2
unknown

Not on your lists

463..660
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_3_scaffold_462_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(573..2513)
DNA (1941bp) protein (647aa)
DNA topoisomerase I (EC:5.99.1.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DF512
DNA topoisomerase I, archaeal Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_3_scaffold_462_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2569..2862)
DNA (294bp) protein (98aa)
HxlR family transcriptional regulator n=2 Tax=Halobiforma lacisalsi RepID=M0LF08_9EURY
HxlR family transcriptional regulator Tax=RBG_16_Euryarchaeota_68_12_curated
HxlR family transcriptional regulator
13_1_40cm_3_scaffold_462_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

3255..3761
DNA (507bp) protein (169aa)
short-chain dehydrogenase/reductase SDR id=14424859 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
short-chain dehydrogenase/reductase SDR Tax=CSP1_2_Dadabacteria
fabG; 3-ketoacyl-ACP reductase
13_1_40cm_3_scaffold_462_6
R_RIF_OD1_07_48_16, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(3724..7329)
DNA (3606bp) protein (1202aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I9J7_9BACL
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_07_48_16_curated
hypothetical protein
13_1_40cm_3_scaffold_462_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7458..8057
DNA (600bp) protein (200aa)
Methyltransferase type 11 n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J0SCC0_9EURY
Methyltransferase family protein {ECO:0000313|EMBL:KCZ71375.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoper
methyltransferase type 11
13_1_40cm_3_scaffold_462_8
unknown

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comp(8151..8672)
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_40cm_3_scaffold_462_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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8730..9020
DNA (291bp) protein (97aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
molybdopterin and thiamine biosynthesis family dinucleotide-utilizing protein; K11996 adenylyltransferase and sulfurtransferase id=24573333 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
MoaD and or or ThiS families
13_1_40cm_3_scaffold_462_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9022..10140
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FA91_SACEN id=5225420 bin=16ft_combo_ws3_JS1 species=Saccharopolyspora erythraea genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glycoside hydrolase family protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
glycosyl hydrolase BNR repeat-containing glycosyl hydrolase
13_1_40cm_3_scaffold_462_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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10198..11124
DNA (927bp) protein (309aa)
Putative dihydrodipicolinate reductase domain protein n=1 Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3W115_9LEPT
NAD-dependent epimerase/dehydratase Tax=RBG_16_Euryarchaeota_68_12_curated
putative nucleoside-diphosphate sugar epimerase
13_1_40cm_3_scaffold_462_12

Not on your lists

11163..11786
DNA (624bp) protein (208aa)
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:EQD54179.1}; EC=2.1.1.100 {ECO:0000313|EMBL:EQD54179.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenom
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=mine drainage metagenome RepID=T1BLM1_9ZZZZ
isoprenylcysteine carboxyl methyltransferase
13_1_40cm_3_scaffold_462_13
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

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12045..13442
DNA (1398bp) protein (466aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01T07_SOLUE
hypothetical protein Tax=RBG_13_Euryarchaeota_57_23_curated
hypothetical protein
13_1_40cm_3_scaffold_462_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(13694..14221)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00037C9A40
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_462_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(14378..15109)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XN52_SORCE
methyltransferase type 11 Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_462_16
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

15172..15963
DNA (792bp) protein (264aa)
Transcriptional regulator, TrmB n=1 Tax=Ferroplasma sp. Type II RepID=T0MA55_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EQB74074.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" s
transcriptional regulator TrmB
13_1_40cm_3_scaffold_462_17
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16054..18036)
DNA (1983bp) protein (661aa)
hypothetical protein id=24547291 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Serine/threonine protein kinase {ECO:0000313|EMBL:ELZ81439.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 1
wcoG; putative cell surface protein
13_1_40cm_3_scaffold_462_18
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists

18153..18956
DNA (804bp) protein (268aa)
protein phosphatase 1K, mitochondrial precursor (EC:3.1.3.16)
Uncharacterized protein {ECO:0000313|EMBL:KKQ93318.1}; TaxID=1618345 species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC2_39_10.;"
Protein phosphatase 2C catalytic subunit id=2412326 bin=GWD1_TM7_39_7 species=Ichthyophthirius multifiliis genus=Ichthyophthirius taxon_order=Hymenostomatida taxon_class=Oligohymenophorea phylum=unknown tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
13_1_40cm_3_scaffold_462_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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18987..20156
DNA (1170bp) protein (390aa)
Saccharopine dehydrogenase n=2 Tax=uncultured Chloroflexi bacterium RepID=H5SM32_9CHLR
saccharopine dehydrogenase family protein Tax=RBG_16_Euryarchaeota_68_12_curated
saccharopine dehydrogenase family protein
13_1_40cm_3_scaffold_462_20
unknown

Not on your lists

20194..20532
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_3_scaffold_462_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(20544..20708)
DNA (165bp) protein (55aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_462_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(20760..21641)
DNA (882bp) protein (294aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_462_23
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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21773..22135
DNA (363bp) protein (121aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_3_scaffold_462_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

22256..22495
DNA (240bp) protein (80aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_462_25
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

22575..22829
DNA (255bp) protein (85aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_462_26
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

22872..23486
DNA (615bp) protein (205aa)
gloB; beta-lactamase-like protein (EC:3.1.2.6) Tax=RBG_16_Euryarchaeota_68_13_curated
gloB; beta-lactamase-like protein (EC:3.1.2.6)
Beta-lactamase-like protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAL2_NITGG
13_1_40cm_3_scaffold_462_27
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(23470..24441)
DNA (972bp) protein (324aa)
DNA topoisomerase I (EC:5.99.1.2) Tax=RBG_16_Euryarchaeota_68_12_curated
DNA topoisomerase I (EC:5.99.1.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DF512
13_1_40cm_3_scaffold_462_28
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(24450..25415)
DNA (966bp) protein (322aa)
DNA topoisomerase I (EC:5.99.1.2) Tax=RBG_16_Euryarchaeota_68_13_curated
DNA topoisomerase I (EC:5.99.1.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DF512
Displaying 28 items

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