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13_1_40cm_3_scaffold_585

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_585_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(1..933)
-----------------
DNA (933bp)
protein (311aa)
Laminin G, domain-containing 2 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G5M0_CHLAD
fibronectin type III domain-containing protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
laminin G domain-containing protein
13_1_40cm_3_scaffold_585_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1191..4775
-----------------
DNA (3585bp)
protein (1195aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F4B81
chromosome segregation protein SMC Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
chromosome segregation protein SMC
13_1_40cm_3_scaffold_585_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

4772..5710
-----------------
DNA (939bp)
protein (313aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037998E1
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_585_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

5707..6336
-----------------
DNA (630bp)
protein (210aa)
Chromosome segregation and condensation protein, ScpB n=1 Tax=mine drainage metagenome RepID=T1BE45_9ZZZZ
scpB; segregation and condensation protein B; K06024 segregation and condensation protein B Tax=RBG_16_Euryarchaeota_68_12_curated
chromosome segregation and condensation protein ScpB
13_1_40cm_3_scaffold_585_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

6426..8669
-----------------
DNA (2244bp)
protein (748aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000377C0CF
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_585_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8609..10894
-----------------
DNA (2286bp)
protein (762aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_585_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10891..12378)
-----------------
DNA (1488bp)
protein (496aa)
hutH; histidine ammonia-lyase (EC:4.3.1.3) Tax=RBG_16_Euryarchaeota_68_12_curated
hutH; histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QIE0_9CYAN
13_1_40cm_3_scaffold_585_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

12441..13400
-----------------
DNA (960bp)
protein (320aa)
ribonuclease Z (EC:3.1.26.11) Tax=RBG_16_Euryarchaeota_68_12_curated
ribonuclease Z (EC:3.1.26.11)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000372EA3B rbh
13_1_40cm_3_scaffold_585_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(13405..14055)
-----------------
DNA (651bp)
protein (217aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037F6670
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
transcription regulator
13_1_40cm_3_scaffold_585_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

14131..14478
-----------------
DNA (348bp)
protein (116aa)
Methionine adenosyltransferase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAW7_ACIB4
13_1_40cm_3_scaffold_585_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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14493..15305
-----------------
DNA (813bp)
protein (271aa)
Methionine adenosyltransferase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RBG_16_Euryarchaeota_68_12_curated
Methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ICM2_ACIB4
13_1_40cm_3_scaffold_585_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(15302..15541)
-----------------
DNA (240bp)
protein (80aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL58_9BACT
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:EEF59409.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivisio
13_1_40cm_3_scaffold_585_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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16014..17294
-----------------
DNA (1281bp)
protein (427aa)
Serine hydroxymethyltransferase / H4MPt-dependent SHMT (EC:2.1.2.1)
Serine hydroxymethyltransferase n=2 Tax=Euryarchaeota RepID=M9SJS8_9EURY rbh
glycine/serine hydroxymethyltransferase Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_585_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(17750..18208)
-----------------
DNA (459bp)
protein (153aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_585_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(18216..18683)
-----------------
DNA (468bp)
protein (156aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003638EAB
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_585_16
unknown

Not on your lists

18784..19233
-----------------
DNA (450bp)
protein (150aa)

This feature has no annotations

13_1_40cm_3_scaffold_585_trna_2
unknown

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comp(19259..19330)
-----------------
DNA (72bp)
transferRNA
13_1_40cm_3_scaffold_585_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

19450..21441
-----------------
DNA (1992bp)
protein (664aa)
rne; ribonuclease E (EC:3.1.4.-); K08300 ribonuclease E [EC:3.1.26.12] Tax=RBG_16_Euryarchaeota_68_12_curated
Proline-rich protein 12 n=2 Tax=Cricetulus griseus RepID=G3IHD3_CRIGR
SARP family transcriptional regulator
13_1_40cm_3_scaffold_585_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

21491..22507
-----------------
DNA (1017bp)
protein (339aa)
TIGR01210 family protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJD4_ACIS0
TIGR01210 family protein Tax=RBG_16_Euryarchaeota_67_27_curated
TIGR01210 family protein
13_1_40cm_3_scaffold_585_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

22545..22871
-----------------
DNA (327bp)
protein (109aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1BUM6_9ZZZZ
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_585_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(22940..23209)
-----------------
DNA (270bp)
protein (90aa)
50S ribosomal protein L12 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WM01_9EURY
rpl12p; 50S ribosomal protein L12 Tax=RBG_16_Euryarchaeota_68_12_curated
rpl12p; 50S ribosomal protein L12
13_1_40cm_3_scaffold_585_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(23244..24242)
-----------------
DNA (999bp)
protein (333aa)
50S ribosomal protein L10 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJ28_ACIS0 rbh
rplP0; acidic ribosomal protein P0 Tax=RBG_16_Euryarchaeota_68_12_curated
ribosomal protein L10
13_1_40cm_3_scaffold_585_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(24253..24801)
-----------------
DNA (549bp)
protein (183aa)
50S ribosomal protein L1 n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAH3_ACIB4
rpl1P; 50S ribosomal protein L1P Tax=RBG_16_Euryarchaeota_68_12_curated
50S ribosomal protein L1
13_1_40cm_3_scaffold_585_23
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

25261..25722
-----------------
DNA (462bp)
protein (154aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EF56_9CHLR
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_3_scaffold_585_24
unknown

Not on your lists

comp(25604..26293)
-----------------
DNA (690bp)
protein (230aa)

This feature has no annotations

13_1_40cm_3_scaffold_585_25
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26319..27635
-----------------
DNA (1317bp)
protein (439aa)
WD40-like repeat protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IE27_HALRX
WD40-like repeat protein
WD40-like repeat protein {ECO:0000313|EMBL:AGB17019.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193
13_1_40cm_3_scaffold_585_26
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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27726..28031
-----------------
DNA (306bp)
protein (102aa)
Putative uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BCP6_MEISD
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_3_scaffold_585_27
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

28151..28966
-----------------
DNA (816bp)
protein (272aa)
Transcriptional regulator, TrmB n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQQ4_METZD
transcriptional regulator TrmB Tax=RBG_16_Euryarchaeota_68_13_curated
transcriptional regulator TrmB
13_1_40cm_3_scaffold_585_28
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(28976..29458)
-----------------
DNA (483bp)
protein (161aa)
50S ribosomal protein L11 n=2 Tax=unclassified Thermoplasmatales RepID=M7TUR0_9EURY
rpl11p; 50S ribosomal protein L11P Tax=RBG_16_Euryarchaeota_68_12_curated
50S ribosomal protein L11
13_1_40cm_3_scaffold_585_29
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(29459..30403)
-----------------
DNA (945bp)
protein (315aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003720D25
Putative transcription antitermination protein NusG Tax=RBG_16_Euryarchaeota_68_12_curated
Putative transcription antitermination protein NusG
Displaying items 1-30 of 51 in total

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