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13_1_40cm_3_scaffold_567

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_567_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3..215
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9L8M6_9BACL
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_567_2
unknown

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comp(632..865)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_3_scaffold_567_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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906..1475
DNA (570bp) protein (190aa)
Tetratricopeptide repeat protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE85_CHLTF
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_567_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

1921..2523
DNA (603bp) protein (201aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_3_scaffold_567_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(2525..2737)
DNA (213bp) protein (71aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_567_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2742..2936)
DNA (195bp) protein (65aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_567_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2992..3288
DNA (297bp) protein (99aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_567_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

3340..3972
DNA (633bp) protein (211aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_567_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4024..4815
DNA (792bp) protein (264aa)
Thymidylate synthase complementing protein ThyX n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG00_9BACT
thymidylate synthase complementing protein ThyX Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
thymidylate synthase complementing protein ThyX
13_1_40cm_3_scaffold_567_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4820..5179)
DNA (360bp) protein (120aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_567_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(5228..5680)
DNA (453bp) protein (151aa)
bcp; peroxiredoxin (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Peroxiredoxin id=5024371 bin=GWA2_Ignavibacteria_55_11 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
peroxiredoxin
13_1_40cm_3_scaffold_567_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5880..6689
DNA (810bp) protein (270aa)
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_567_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6871..8697
DNA (1827bp) protein (609aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036C60B9
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RecA-superfamily ATPase implicated in signal transduction-like protein
13_1_40cm_3_scaffold_567_14
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(8699..9679)
DNA (981bp) protein (327aa)
N-acetyltransferase GCN5 Tax=RBG_16_Euryarchaeota_67_27_curated
N-acetyltransferase GCN5 id=14630928 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
13_1_40cm_3_scaffold_567_15
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(9734..10663)
DNA (930bp) protein (310aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_3_scaffold_567_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(10706..12124)
DNA (1419bp) protein (473aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J6M3_MARPK rbh
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_16_Euryarchaeota_67_27_curated
oligopeptide/dipeptide ABC transporter ATP-binding protein
13_1_40cm_3_scaffold_567_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(12121..13080)
DNA (960bp) protein (320aa)
oppD; oligopeptide ABC transporter ATP-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
oppD; oligopeptide ABC transporter ATP-binding protein id=24578966 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Actinopolymorpha alba genus=Actinopolymorpha taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
oppD; oligopeptide ABC transporter ATP-binding protein
13_1_40cm_3_scaffold_567_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(13077..14435)
DNA (1359bp) protein (453aa)
ABC transporter; K02034 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_68_13_curated
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein id=24578967 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermosipho melanesiensis genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
binding-protein-dependent transport systems inner membrane component
13_1_40cm_3_scaffold_567_19
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(14440..15471)
DNA (1032bp) protein (344aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J9K9_NOSP7
binding-protein-dependent transporter inner membrane component; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_68_13_curated
binding-protein-dependent transporters inner membrane component
13_1_40cm_3_scaffold_567_20
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(15542..17254)
DNA (1713bp) protein (571aa)
dppA; peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Euryarchaeota_68_13_curated
dppA; peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein id=24578969 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Archaeoglobus fulgidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
dppA; peptide ABC transporter substrate-binding protein
13_1_40cm_3_scaffold_567_21
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(17364..18383)
DNA (1020bp) protein (340aa)
Flap endonuclease 1 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMZ0_ACIS0
flap structure-specific endonuclease Tax=RBG_16_Euryarchaeota_68_13_curated
flap structure-specific endonuclease
13_1_40cm_3_scaffold_567_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(18443..19645)
DNA (1203bp) protein (401aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3B4_9ARCH
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_567_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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19740..20207
DNA (468bp) protein (156aa)
Transcription factor zinc-finger n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TDJ4_9EURY
Transcription factor zinc-finger Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_567_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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20255..21193
DNA (939bp) protein (313aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3B3_9ARCH
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_567_25
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

21284..22780
DNA (1497bp) protein (499aa)
MoaA/NifB/PqqE family protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7H3_9EURY
MoaA/NifB/PqqE family protein Tax=RBG_16_Euryarchaeota_67_27_curated
MoaA/NifB/PqqE family protein
Displaying 25 items

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