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13_1_40cm_3_scaffold_6487

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6487_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

1..1269
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0B8Z3_9EURY
putative polysaccharide biosynthesis protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_6487_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(1266..1565)
DNA (300bp) protein (100aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_6487_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1812..2717
DNA (906bp) protein (302aa)
Putative phosphoserine phosphatase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T618_9EURY rbh
putative phosphoserine phosphatase Tax=RBG_16_Euryarchaeota_68_12_curated
putative phosphoserine phosphatase
13_1_40cm_3_scaffold_6487_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2957..4300
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F0085
signal recognition particle protein Srp54 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
signal recognition particle protein Srp54
13_1_40cm_3_scaffold_6487_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(4406..5161)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036653CE rbh
DNA polymerase sliding clamp Tax=RBG_16_Euryarchaeota_68_12_curated
DNA polymerase sliding clamp
13_1_40cm_3_scaffold_6487_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(5229..5552)
DNA (324bp) protein (108aa)
transcription termination factor Tfs (EC:2.7.7.6); K03057 transcription elongation factor Tax=RBG_16_Euryarchaeota_68_12_curated
rpoM; DNA-directed RNA polymerase subunit M (EC:2.7.7.6)
DNA-directed RNA polymerase subunit M n=2 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=RPOM_METTH
13_1_40cm_3_scaffold_6487_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(5594..6490)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C9B4D
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_6487_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(6582..7106)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B6CA34
GGDEF domain-containing protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_6487_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(7208..7924)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00036D6B23
fructose-bisphosphate aldolase Tax=RBG_16_Euryarchaeota_68_12_curated
autoinducer 2 aldolase
13_1_40cm_3_scaffold_6487_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(8067..8792)
DNA (726bp) protein (242aa)
alcohol dehydrogenase; K00008 L-iditol 2-dehydrogenase [EC:1.1.1.14] Tax=RBG_16_Euryarchaeota_68_12_curated
Alcohol dehydrogenase GroES domain protein n=1 Tax=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) RepID=A4YD71_METS5
alcohol dehydrogenase
13_1_40cm_3_scaffold_6487_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

9164..10522
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037249A6
sodium/hydrogen exchanger Tax=RBG_16_Euryarchaeota_68_13_curated
sodium/hydrogen exchanger family protein
13_1_40cm_3_scaffold_6487_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(10537..10872)
DNA (336bp) protein (112aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FGW5_DESAA
cupin Tax=RBG_16_Euryarchaeota_68_13_curated
cupin
13_1_40cm_3_scaffold_6487_trna_2
unknown

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comp(10938..11048)
DNA (111bp)
transferRNA
13_1_40cm_3_scaffold_6487_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

11141..12058
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1D899_9ZZZZ
Uncharacterized protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_3_scaffold_6487_trna_1
unknown

Not on your lists

comp(12074..12147)
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_6487_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(12269..12511)
DNA (243bp) protein (81aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_6487_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

12767..13801
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037438DC
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_6487_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

13813..14934
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000375006B
type II secretion system protein E; K07332 archaeal flagellar protein FlaI Tax=RBG_16_Euryarchaeota_68_12_curated
type II secretion system protein E
Displaying 18 items

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