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13_1_40cm_3_scaffold_6748

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6748_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2..391
DNA (390bp) protein (130aa)
DNA topoisomerase (ATP-hydrolyzing) (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] Tax=RBG_16_Euryarchaeota_68_12_curated
DNA topoisomerase VI subunit A (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit A n=1 Tax=uncultured euryarchaeote Alv-FOS4 RepID=Q3SA64_9EURY
13_1_40cm_3_scaffold_6748_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(398..1246)
DNA (849bp) protein (283aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_6748_trna_1
unknown

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comp(1217..1290)
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_6748_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(1347..1646)
DNA (300bp) protein (100aa)
small GTP-binding protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_6748_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(1691..2320)
DNA (630bp) protein (210aa)
adk; adenylate kinase Adk (EC:2.7.4.3) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
adenylate kinase n=1 Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B5A716
adenylate kinase
13_1_40cm_3_scaffold_6748_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2372..3304)
DNA (933bp) protein (311aa)
mvd; diphosphomevalonate decarboxylase; K01597 diphosphomevalonate decarboxylase [EC:4.1.1.33] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003814E9E
diphosphomevalonate decarboxylase
13_1_40cm_3_scaffold_6748_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(3292..4026)
DNA (735bp) protein (245aa)
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily id=14626063 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
putative haloacid dehalogenase
13_1_40cm_3_scaffold_6748_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(4036..4440)
DNA (405bp) protein (135aa)
archease Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein id=14425167 bin=bin1_lowGC species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
13_1_40cm_3_scaffold_6748_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4477..5232)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003825574
putative radical activating enzyme; K10026 queuosine biosynthesis protein QueE Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
radical SAM domain-containing protein
13_1_40cm_3_scaffold_6748_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(5262..5984)
DNA (723bp) protein (241aa)
7-cyano-7-deazaguanine synthase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5I9Q6_ACIB4 rbh
exsB protein; K06920 queuosine biosynthesis protein QueC Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
exsB protein
13_1_40cm_3_scaffold_6748_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(6024..7139)
DNA (1116bp) protein (372aa)
Peptidase M42 family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XE97_9BACT
Peptidase M42 family protein {ECO:0000313|EMBL:EEF61988.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source=
hypothetical protein
13_1_40cm_3_scaffold_6748_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7197..7439
DNA (243bp) protein (81aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_6748_12
unknown

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comp(7436..8197)
DNA (762bp) protein (254aa)

This feature has no annotations

13_1_40cm_3_scaffold_6748_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(8326..8481)
DNA (156bp) protein (52aa)
Diphthamide biosynthesis protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E9E6_METEZ
diphthamide biosynthesis protein; K07561 diphthamide synthase subunit DPH2 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
diphthamide biosynthesis protein
Displaying 14 items

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