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13_1_40cm_3_scaffold_7598

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_7598_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

3..617
DNA (615bp) protein (205aa)
Membrane protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1C2J4_9ZZZZ
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_7598_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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614..1705
DNA (1092bp) protein (364aa)
Putative glycosyltransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YV48_METPS
glycosyl transferase, group 1 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative glycosyltransferase
13_1_40cm_3_scaffold_7598_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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1702..2772
DNA (1071bp) protein (357aa)
Glycosyl transferase, group 1 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B824_METTP
putative glycosyltransferase Tax=RBG_16_Euryarchaeota_68_13_curated
glycosyl transferase, group 1
13_1_40cm_3_scaffold_7598_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2777..4054
DNA (1278bp) protein (426aa)
Multi antimicrobial extrusion protein MatE n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0T1U8_SYNGF
putative polysaccharide biosynthesis protein Tax=RBG_16_Euryarchaeota_68_12_curated
multi antimicrobial extrusion protein MatE
13_1_40cm_3_scaffold_7598_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(4051..4437)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N943_9ARCH
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_7598_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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4549..5499
DNA (951bp) protein (317aa)
Putative phosphoserine phosphatase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T618_9EURY
putative phosphoserine phosphatase Tax=RBG_16_Euryarchaeota_68_12_curated
putative phosphoserine phosphatase
13_1_40cm_3_scaffold_7598_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


5698..7041
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F0085 rbh
signal recognition particle protein Srp54 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
signal recognition particle protein Srp54
13_1_40cm_3_scaffold_7598_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(7055..7195)
DNA (141bp) protein (47aa)
DNA polymerase sliding clamp n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IG41_ACIB4
DNA polymerase sliding clamp Tax=RBG_16_Euryarchaeota_68_12_curated
proliferating cell nuclear antigen PcnA
13_1_40cm_3_scaffold_7598_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(7189..7767)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036653CE
DNA polymerase sliding clamp Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA polymerase sliding clamp
13_1_40cm_3_scaffold_7598_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(7835..8158)
DNA (324bp) protein (108aa)
transcription termination factor Tfs (EC:2.7.7.6); K03057 transcription elongation factor Tax=RBG_16_Euryarchaeota_68_12_curated
rpoM; DNA-directed RNA polymerase subunit M (EC:2.7.7.6)
DNA-directed RNA polymerase subunit M n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RPOM_METJA
13_1_40cm_3_scaffold_7598_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8333..9088)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C9B4D
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_7598_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(9177..9701)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B6CA34
GGDEF domain-containing protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_7598_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(9766..10566)
DNA (801bp) protein (267aa)
lsrF; putative aldolase LsrF (EC:4.1.2.-)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0MNA6_9EURY
fructose-bisphosphate aldolase Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_7598_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10699..11718)
DNA (1020bp) protein (340aa)
alcohol dehydrogenase; K00008 L-iditol 2-dehydrogenase [EC:1.1.1.14] Tax=RBG_16_Euryarchaeota_68_12_curated
Alcohol dehydrogenase GroES domain protein n=1 Tax=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) RepID=A4YD71_METS5
alcohol dehydrogenase
13_1_40cm_3_scaffold_7598_15
unknown

Not on your lists

comp(11934..12260)
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_3_scaffold_7598_16
unknown

Not on your lists

comp(12667..12939)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_3_scaffold_7598_17
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(13124..13459)
DNA (336bp) protein (112aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FGW5_DESAA
cupin Tax=RBG_16_Euryarchaeota_68_13_curated
cupin
13_1_40cm_3_scaffold_7598_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(13511..14023)
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N3Y4_SLAHD
Uncharacterized protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_7598_trna_2
unknown

Not on your lists

comp(14100..14210)
DNA (111bp)
transferRNA
13_1_40cm_3_scaffold_7598_19
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

14303..15277
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1D899_9ZZZZ
Uncharacterized protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_3_scaffold_7598_trna_1
unknown

Not on your lists

comp(15293..15366)
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_7598_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(15488..15730)
DNA (243bp) protein (81aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 22 items

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