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13_1_40cm_3_scaffold_311

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_311_1
unknown

Not on your lists

comp(1..303)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_3_scaffold_311_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(300..1325)
DNA (1026bp) protein (342aa)
threonine aldolase (EC:4.1.2.5); K01620 threonine aldolase [EC:4.1.2.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E2_GEMAT
13_1_40cm_3_scaffold_311_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1322..2188)
DNA (867bp) protein (289aa)
tRNA-processing ribonuclease BN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E1_GEMAT
membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribonuclease BN
13_1_40cm_3_scaffold_311_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2185..2526)
DNA (342bp) protein (114aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_311_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2523..3887)
DNA (1365bp) protein (455aa)
Putative fructose-bisphosphate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7D9_GEMAT
putative fructose-bisphosphate aldolase Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative fructose-bisphosphate aldolase
13_1_40cm_3_scaffold_311_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3899..4681)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7D7_GEMAT
hypothetical protein; K06167 PhnP protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_311_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4683..6110)
DNA (1428bp) protein (476aa)
pykA; pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RBG_16_Gemmatimonadetes_66_8_curated
pykA; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7D6_GEMAT rbh
13_1_40cm_3_scaffold_311_8
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6171..6632)
DNA (462bp) protein (154aa)
MarR family transcriptional regulator n=1 Tax=Sphingobium indicum B90A RepID=I5B8D3_9SPHN
MarR family transcriptional regulator {ECO:0000313|EMBL:EIM65835.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp
MarR family transcriptional regulator
13_1_40cm_3_scaffold_311_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6718..7437
DNA (720bp) protein (240aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A524_GEMAT rbh
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAH37334.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
13_1_40cm_3_scaffold_311_10
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7434..9167
DNA (1734bp) protein (578aa)
Putative ABC transporter, permease protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBL2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFE67009.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
hypothetical protein
13_1_40cm_3_scaffold_311_11
unknown

Not on your lists

comp(9168..9545)
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_40cm_3_scaffold_311_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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9572..10150
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XDG1_NAKMY
hypothetical protein Tax=RBG_16_Chloroflexi_63_12_curated
hypothetical protein
13_1_40cm_3_scaffold_311_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10147..10539)
DNA (393bp) protein (131aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_311_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10660..13149)
DNA (2490bp) protein (830aa)
nrdJ; ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribonucleoside-diphosphate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X4_GEMAT
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
13_1_40cm_3_scaffold_311_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13332..13874)
DNA (543bp) protein (181aa)
Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKR7_SINAD
carbonic anhydrase/acetyltransferase
Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase {ECO:0000313|EMBL:AGA29852.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomyceta
13_1_40cm_3_scaffold_311_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13838..15736)
DNA (1899bp) protein (633aa)
putative serine/threonine protein kinase; K11912 serine/threonine-protein kinase PpkA [EC:2.7.11.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
serine/threonine protein kinase n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B765FC
protein kinase
13_1_40cm_3_scaffold_311_17
unknown

Not on your lists

comp(15792..18038)
DNA (2247bp) protein (749aa)

This feature has no annotations

13_1_40cm_3_scaffold_311_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18078..20795)
DNA (2718bp) protein (906aa)
Uncharacterized protein n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2FXZ8_9GAMM
WD40-like beta Propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AHG90382.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_311_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20792..21313)
DNA (522bp) protein (174aa)
putative N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X1_GEMAT
cell wall hydrolase/autolysin
Displaying 19 items

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