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13_1_40cm_3_scaffold_3273

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3273_1
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..162)
DNA (162bp) protein (54aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CDK6_DESTA
ABC-type transport system, involved in lipoprotein release, permease component
ABC transporter permease Tax=RBG_13_Deltaproteobacteria_52_11b_curated
13_1_40cm_3_scaffold_3273_2
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(170..1336)
DNA (1167bp) protein (389aa)
Putative uncharacterized protein id=3888117 bin=GWF2_Melioribacter_38_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
ABC transporter ATP-binding protein
13_1_40cm_3_scaffold_3273_3
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

comp(1347..2021)
DNA (675bp) protein (225aa)
ABC transporter related protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L8R1_9BACT
ABC transporter; K02003 putative ABC transport system ATP-binding protein Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
ABC transporter-like protein
13_1_40cm_3_scaffold_3273_4
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2030..3214)
DNA (1185bp) protein (395aa)
Secretion protein HlyD Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Efflux transporter, RND family, MFP subunit id=3888111 bin=GWF2_Melioribacter_38_21 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
RND family efflux transporter MFP subunit
13_1_40cm_3_scaffold_3273_5
Luminiphilus syltensis, Luminiphilus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3334..5436
DNA (2103bp) protein (701aa)
tolB; peptidase S9 prolyl oligopeptidase active site domain protein (EC:3.4.19.1)
Peptidase S9, prolyl oligopeptidase active site region n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KVS6_9GAMM rbh
Peptidase S9, prolyl oligopeptidase active site region {ECO:0000313|EMBL:EED35317.1}; TaxID=565045 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Luminiphilus.;" source
13_1_40cm_3_scaffold_3273_6
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5767..6222
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003761E92
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC47728.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
13_1_40cm_3_scaffold_3273_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6339..8012
DNA (1674bp) protein (558aa)
diguanylate cyclase id=14428813 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase Tax=CSP1_5_NC10
diguanylate cyclase
13_1_40cm_3_scaffold_3273_8
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8019..8906)
DNA (888bp) protein (296aa)
LysR family transcriptional regulator n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2E9C9_9BURK
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AJK45716.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
13_1_40cm_3_scaffold_3273_9
Streptomyces katrae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8957..9538)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034A8209
Uncharacterized protein {ECO:0000313|EMBL:KJY26631.1}; TaxID=68223 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces katrae.;"
ycfQ; TetR family transcriptional regulator
13_1_40cm_3_scaffold_3273_10
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9734..11377
DNA (1644bp) protein (548aa)
signal transduction histidine kinase, nitrogen specific, NtrB Tax=CG_Desulfarul_01
PAS/PAC sensor hybrid histidine kinase id=14623097 bin=bin5_DeltaP species=Zavarzinella formosa genus=Zavarzinella taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
multi-sensor hybrid histidine kinase
13_1_40cm_3_scaffold_3273_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

11378..12091
DNA (714bp) protein (238aa)
putative PAS/PAC sensor protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PAS/PAC sensor hybrid histidine kinase id=4942499 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PAS domain S-box
13_1_40cm_3_scaffold_3273_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12212..12430
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=2 Tax=Desulfovibrio RepID=B8DQF6_DESVM
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Translation initiation factor IF-1
13_1_40cm_3_scaffold_3273_13
unknown

Not on your lists

12624..12914
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_3_scaffold_3273_14
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12898..13770)
DNA (873bp) protein (291aa)
pirin; K06911 Tax=GWA2_Ignavibacteria_54_16_curated
hypothetical protein; K06911 id=24497726 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
pirin
13_1_40cm_3_scaffold_3273_15
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

13905..14957
DNA (1053bp) protein (351aa)
Putative Glycoside hydrolase, family 5 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFX8_9CHLR
Putative Glycoside hydrolase, family 5 {ECO:0000313|EMBL:CCF83590.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrol
celA2; endo-1,4-beta-glucanase
13_1_40cm_3_scaffold_3273_16
unknown

Not on your lists

comp(15075..15539)
DNA (465bp) protein (155aa)

This feature has no annotations

13_1_40cm_3_scaffold_3273_17
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

comp(15664..16821)
DNA (1158bp) protein (386aa)
Alpha-galactosidase; K07407 alpha-galactosidase [EC:3.2.1.22] Tax=RBG_13_Aminicenantes_63_10_curated
PREDICTED: alpha-galactosidase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1743B
alpha-galactosidase
13_1_40cm_3_scaffold_3273_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(16839..18749)
DNA (1911bp) protein (637aa)
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Putative ABC transporter ATP-binding/permease protein id=5009185 bin=GWA2_Ignavibacteria_55_11 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
ABC transporter transmembrane region
13_1_40cm_3_scaffold_3273_19
unknown

Not on your lists

comp(18753..19346)
DNA (594bp) protein (198aa)

This feature has no annotations

13_1_40cm_3_scaffold_3273_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19371..19805)
DNA (435bp) protein (145aa)
Peptidase S45, penicillin amidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WT4_SOLUE
peptidase S45, penicillin amidase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase S45, penicillin amidase
13_1_40cm_3_scaffold_3273_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19774..21465)
DNA (1692bp) protein (564aa)
Peptidase S45, penicillin amidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WT4_SOLUE
peptidase S45, penicillin amidase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase S45, penicillin amidase
13_1_40cm_3_scaffold_3273_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21458..22000)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZ65_9CHLR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88624.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_3273_23
unknown

Not on your lists

22069..22626
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037C812B
Displaying 23 items

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