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13_1_40cm_3_scaffold_3351

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3351_1
unknown

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3..107
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_3_scaffold_3351_2
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(110..1132)
DNA (1023bp) protein (341aa)
methionine sulfoxide reductase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B630EE
methionine-R-sulfoxide reductase
Tax=BJP_IG2069_Desfulfarculales_53_13
13_1_40cm_3_scaffold_3351_3
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1190..3079
DNA (1890bp) protein (630aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cy
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QID1_9DELT
PAS/PAC sensor signal transduction histidine kinase
13_1_40cm_3_scaffold_3351_4

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3088..3462
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL50997.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Response regulator receiver protein id=4422898 bin=GWF2_Lentisphaerae_50_93 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
response regulator receiver protein
13_1_40cm_3_scaffold_3351_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3478..5007
DNA (1530bp) protein (510aa)
Response regulator receiver id=3068376 bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
histidine kinase Tax=GWC2_Rokubacteria_70_16_curated
histidine kinase
13_1_40cm_3_scaffold_3351_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5011..7272)
DNA (2262bp) protein (754aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A719_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88939.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_3351_7
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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comp(7597..8004)
DNA (408bp) protein (136aa)
Putative membrane protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AE62_COLFT
transmembrane_regions 17..39 Tax=RBG_16_KB1_OP1_55_9_curated
hypothetical protein
13_1_40cm_3_scaffold_3351_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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8051..9685
DNA (1635bp) protein (545aa)
allantoinase; K01466 allantoinase [EC:3.5.2.5] Tax=RBG_16_RIF_WS3X_71_46_curated
allB; allantoinase (EC:3.5.2.5)
Allantoinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8U4_SORC5
13_1_40cm_3_scaffold_3351_9
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9670..10623
DNA (954bp) protein (318aa)
Allantoicase {ECO:0000313|EMBL:AKF83338.1}; EC=3.5.3.4 {ECO:0000313|EMBL:AKF83338.1};; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcace
alc; bifunctional allantoicase/OHCU decarboxylase (EC:3.5.3.4)
Probable allantoicase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GBG2_SORC5
13_1_40cm_3_scaffold_3351_10
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10634..11125
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G7W2_9DELT
2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) decarboxylase {ECO:0000313|EMBL:AKF09419.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sand
putative OHCU decarboxylase
13_1_40cm_3_scaffold_3351_11
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11122..11436
DNA (315bp) protein (105aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU3
5-hydroxyisourate hydrolase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QX81_9DELT
hydroxyisourate hydrolase
13_1_40cm_3_scaffold_3351_12
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11426..12625
DNA (1200bp) protein (400aa)
Putative membrane protein n=1 Tax=Pseudomonas stutzeri RCH2 RepID=L0GK32_PSEST rbh
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE21862.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroo
13_1_40cm_3_scaffold_3351_13
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12622..13896)
DNA (1275bp) protein (425aa)
Pyruvate/Phosphoenolpyruvate kinase domain protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08NX3_STIAD rbh
Uncharacterized protein {ECO:0000313|EMBL:KFE62503.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
pyruvate/phosphoenolpyruvate kinase domain-containing protein
13_1_40cm_3_scaffold_3351_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(13893..14723)
DNA (831bp) protein (277aa)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LJT7_HALO1
FAD-binding molybdopterin dehydrogenase protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
FAD-binding molybdopterin dehydrogenase protein
13_1_40cm_3_scaffold_3351_15

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comp(14720..17326)
DNA (2607bp) protein (869aa)
Putative xanthine dehydrogenase n=1 Tax=uncultured bacterium 66 RepID=E3T662_9BACT
Putative xanthine dehydrogenase {ECO:0000313|EMBL:ADC35806.1}; TaxID=698391 species="Bacteria; environmental samples.;" source="uncultured bacterium 66.;"
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_1_40cm_3_scaffold_3351_16
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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17414..17845
DNA (432bp) protein (144aa)
aldehyde oxidase small subunit; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] Tax=RBG_16_Chloroflexi_63_12_curated
(2Fe-2S)-binding domain-containing protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGE0_THEM7
(2Fe-2S)-binding domain-containing protein
13_1_40cm_3_scaffold_3351_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(18300..18554)
DNA (255bp) protein (85aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_3_scaffold_3351_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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18653..20539
DNA (1887bp) protein (629aa)
putative carbon monoxide dehydrogenase large chain (EC:1.2.99.2) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
tmr:Tmar_1478 xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) id=1245294 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
13_1_40cm_3_scaffold_3351_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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20536..21435
DNA (900bp) protein (300aa)
molybdopterin dehydrogenase FAD-binding protein; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8T3_SPHTD
molybdopterin dehydrogenase FAD-binding protein
13_1_40cm_3_scaffold_3351_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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21432..23585
DNA (2154bp) protein (718aa)
amidase; K01426 amidase [EC:3.5.1.4] Tax=GWC2_Gemmatimonadetes_71_10_curated
amidase (EC:3.5.1.4)
Amidase id=4905367 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_3_scaffold_3351_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(23574..25073)
DNA (1500bp) protein (500aa)
AMP-dependent synthetase and ligase (EC:6.2.1.3) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Nostoc sp. PCC 7107 RepID=K9QGY7_9NOSO rbh
13_1_40cm_3_scaffold_3351_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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25473..25823
DNA (351bp) protein (117aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_3_scaffold_3351_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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25873..26646
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036BD71B
Succinate dehydrogenase {ECO:0000313|EMBL:KIC95835.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
13_1_40cm_3_scaffold_3351_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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26646..28427
DNA (1782bp) protein (594aa)
sdhA; succinate dehydrogenase flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Succinate dehydrogenase subunit A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRW4_KORVE
sdhA; succinate dehydrogenase flavoprotein subunit
13_1_40cm_3_scaffold_3351_25

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28650..29123
DNA (474bp) protein (158aa)
fumarate reductase n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036EB43A
Fumarate reductase {ECO:0000313|EMBL:AHN97959.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
fumarate reductase iron-sulfur subunit
13_1_40cm_3_scaffold_3351_26
R_NC10_66_22, NC10, Bacteria

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29126..29410
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRW2_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
Displaying 26 items

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