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13_1_40cm_3_scaffold_5965

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5965_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1..360)
DNA (360bp) protein (120aa)
Putative peptide ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E3_GEMAT
putative peptide ABC transporter substrate binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative peptide ABC transporter substrate binding protein
13_1_40cm_3_scaffold_5965_2
unknown

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628..798
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_3_scaffold_5965_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(1099..3966)
DNA (2868bp) protein (956aa)
gcvP; glycine dehydrogenase (EC:1.4.4.2); K00281 glycine dehydrogenase [EC:1.4.4.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
glycine dehydrogenase n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003479E39 rbh
Glycine dehydrogenase [decarboxylating]
13_1_40cm_3_scaffold_5965_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(3966..4649)
DNA (684bp) protein (228aa)
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
UPF0173 metal-dependent hydrolase KSU1_D0187 id=4815508 bin=GWC2_Deltaproteobacteria_55_46 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
metal-dependent hydrolase
13_1_40cm_3_scaffold_5965_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4694..5083)
DNA (390bp) protein (130aa)
Glycine cleavage system H protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E6_GEMAT
gcvH; glycine cleavage system H protein; K02437 glycine cleavage system H protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
gcvH; glycine cleavage system H protein
13_1_40cm_3_scaffold_5965_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5153..5773)
DNA (621bp) protein (207aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E7_GEMAT
13_1_40cm_3_scaffold_5965_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5777..6382)
DNA (606bp) protein (202aa)
tdk; thymidine kinase (EC:2.7.1.21); K00857 thymidine kinase [EC:2.7.1.21] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Thymidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F0_GEMAT
Thymidine kinase
13_1_40cm_3_scaffold_5965_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(6561..8153)
DNA (1593bp) protein (531aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3J4_THECD
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
DbpA RNA-binding domain protein
13_1_40cm_3_scaffold_5965_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8350..9537
DNA (1188bp) protein (396aa)
aspC; aspartate aminotransferase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aspC; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F2_GEMAT rbh
13_1_40cm_3_scaffold_5965_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9572..10693
DNA (1122bp) protein (374aa)
Tetratricopeptide repeat protein n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UMN4_SPIAZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88091.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_5965_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10828..11343
DNA (516bp) protein (172aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_5965_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11346..11984
DNA (639bp) protein (213aa)
O-methyltransferase, family 3 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXH6_ROSS1
O-methyltransferase family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
O-methyltransferase family protein
13_1_40cm_3_scaffold_5965_13
CG_Mariprof_02, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11981..12709
DNA (729bp) protein (243aa)
ubiquinone biosynthesis O-methyltransferase; K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] Tax=CG_Mariprof_02
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI000367DCED
Displaying 13 items

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