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13_1_40cm_3_scaffold_677

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_677_1
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

191..703
DNA (513bp) protein (171aa)
Tax=BJP_S1_SUB10_Methylophilales_55_32
13_1_40cm_3_scaffold_677_trna_1
unknown

Not on your lists

818..889
DNA (72bp)
transferRNA
13_1_40cm_3_scaffold_677_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

956..2569
DNA (1614bp) protein (538aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_677_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3470..3892
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T2_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_677_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3889..4884
DNA (996bp) protein (332aa)
GTPase Der n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DER_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
engA; GTP-binding protein EngA
13_1_40cm_3_scaffold_677_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4935..5171
DNA (237bp) protein (79aa)
GTPase Der n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DER_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
engA; GTP-binding protein EngA
13_1_40cm_3_scaffold_677_6
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

5168..5782
DNA (615bp) protein (205aa)
membrane protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUI6_9BACT
plsY; membrane protein
13_1_40cm_3_scaffold_677_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5779..6780
DNA (1002bp) protein (334aa)
gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=RBG_16_Gemmatimonadetes_66_8_curated
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T5_GEMAT rbh
13_1_40cm_3_scaffold_677_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6777..7154
DNA (378bp) protein (126aa)
MerR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T6_GEMAT
MerR family transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
regulatory protein MerR
13_1_40cm_3_scaffold_677_9
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

7138..7860
DNA (723bp) protein (241aa)
putative glycosyltransferase (EC:2.4.-.-) id=24452186 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Glycosyltransferase involved in cell wall biogenesis (EC:2.4.-.-)
Glycosyltransferase Tax=RBG_16_Planctomycetes_59_8_curated
13_1_40cm_3_scaffold_677_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7857..8606
DNA (750bp) protein (250aa)
surE; 5'-nucleotidase SurE (EC:3.1.3.5); K03787 5'-nucleotidase [EC:3.1.3.5] Tax=RBG_16_Gemmatimonadetes_66_8_curated
5'-nucleotidase SurE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SURE_GEMAT
Survival protein SurE-like phosphatase/nucleotidase
13_1_40cm_3_scaffold_677_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8588..9256
DNA (669bp) protein (223aa)
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T8_GEMAT
Protein-L-isoaspartate O-methyltransferase
13_1_40cm_3_scaffold_677_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9249..9890
DNA (642bp) protein (214aa)
DedA family protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AKP6_PELPD
DedA family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DedA family protein
13_1_40cm_3_scaffold_677_13
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10176..10709
DNA (534bp) protein (178aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
Adenine phosphoribosyltransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QN48_9DELT
apt; adenine phosphoribosyltransferase
13_1_40cm_3_scaffold_677_trna_2
unknown

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10733..10806
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_677_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10860..11540
DNA (681bp) protein (227aa)
Tetratricopeptide TPR_1 repeat-containing protein n=2 Tax=Myroides RepID=H1ZBR5_MYROD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_677_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11623..12492)
DNA (870bp) protein (290aa)
dapE; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Diaminopimelate epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DAPF_GEMAT
Diaminopimelate epimerase
13_1_40cm_3_scaffold_677_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12444..13166)
DNA (723bp) protein (241aa)
putative polyprenol-phosphate mannosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative polyprenol-phosphate mannosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U4_GEMAT
putative polyprenol-phosphate mannosyltransferase
13_1_40cm_3_scaffold_677_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13159..15483)
DNA (2325bp) protein (775aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A770_GEMAT
hypothetical membrane protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical membrane protein
13_1_40cm_3_scaffold_677_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(15480..16406)
DNA (927bp) protein (309aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U6_GEMAT
hypothetical membrane protein; K07027 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD
13_1_40cm_3_scaffold_677_19
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

comp(16403..17854)
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B36A41
hypothetical protein
Tax=BJP_IG2102_BRC1_58_13
13_1_40cm_3_scaffold_677_20
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(17851..18324)
DNA (474bp) protein (158aa)
Chloramphenicol acetyltransferase {ECO:0000313|EMBL:AKB17607.1}; EC=2.3.1.28 {ECO:0000313|EMBL:AKB17607.1};; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanos
UPI0003D1A06F related cluster n=1 Tax=unknown RepID=UPI0003D1A06F
galactoside-O-acetyltransferase
13_1_40cm_3_scaffold_677_21
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(18321..19238)
DNA (918bp) protein (306aa)
Methicillin resistance protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLV7_9CHLR
Methicillin resistance protein {ECO:0000313|EMBL:EFH86757.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacte
13_1_40cm_3_scaffold_677_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20514..21479)
DNA (966bp) protein (322aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U8_GEMAT
glycosyl transferase family 2
13_1_40cm_3_scaffold_677_23
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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comp(21476..22933)
DNA (1458bp) protein (486aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Acidobacteria_68_9_curated
RNA polymerase sigma-54 factor, RpoN
13_1_40cm_3_scaffold_677_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(22930..23469)
DNA (540bp) protein (180aa)
putative ABC transporter ATP-binding protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V0_GEMAT
ABC transporter related protein
13_1_40cm_3_scaffold_677_25
unknown

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24248..24511
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_3_scaffold_677_26
unknown

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24508..25536
DNA (1029bp) protein (343aa)

This feature has no annotations

13_1_40cm_3_scaffold_677_27
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(25377..25937)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V2_GEMAT
hypothetical protein Tax=RBG_16_Acidobacteria_68_9_curated
protein of unknown function DUF1239
13_1_40cm_3_scaffold_677_28
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25934..26908)
DNA (975bp) protein (325aa)
kdsD; arabinose 5-phosphate isomerase (EC:5.3.1.13); K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13] Tax=GWC2_Gemmatimonadetes_71_10_curated
kdsD; arabinose 5-phosphate isomerase (EC:5.3.1.13)
Arabinose 5-phosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V3_GEMAT
Displaying items 1-30 of 54 in total

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