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13_1_40cm_3_scaffold_15279_12

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: comp(10056..10592)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z3_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 144.0
  • Bit_score: 204
  • Evalue 7.90e-50
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 143.0
  • Bit_score: 238
  • Evalue 5.30e-60
rpsB; 30S ribosomal protein S2 similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 144.0
  • Bit_score: 204
  • Evalue 2.20e-50

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 537
ATGGCACAACCCCAGTTGCAGGACCTGCTCGAGGCGGGGGTCCACTTCGGGCACCAGACCCGACGGTGGAACCCCAAGATGCGGCGCTTCATCTTCGCCGAGCGCTCGGGCATCTACATCATCGATCTCCAGAAGACCCTGCATCAGCTCCAGCAGGCCCAGGAGCTGCTGCGCAGCGTCGTGCTGCGCAACGAGGGCGTGCTCTTCGTGTGCACGAAGAAGCAGCTCAAAGGGATCCTCCAGGCGGAGGCGCAGCGCTGCGGCGGGTTCTACGTGACCGAGCGGTGGCTGGGCGGCACGCTCACCAACTTCCAGACCATCAAGAAGCAGATCAAGCGGCTGCGCGAGCTGGAGCAGGGCCTCTCCGAGGGCGAGTACCAGCACCACACCAAGAAGGAGCAGCTGCTGTTCGACCGGGAGCGCCCGGAGCGCTGTTCGTGGTGGACGCGAAGAAGGAGCGCATCGCCATCAACGAGGCGAACAAACTGGGCATTCCCGTGGTGGCGATCGTGGACACGAATGCCGACCCGGATCTGA
PROTEIN sequence
Length: 179
MAQPQLQDLLEAGVHFGHQTRRWNPKMRRFIFAERSGIYIIDLQKTLHQLQQAQELLRSVVLRNEGVLFVCTKKQLKGILQAEAQRCGGFYVTERWLGGTLTNFQTIKKQIKRLRELEQGLSEGEYQHHTKKEQLLFDRERPERCSWWTRRRSASPSTRRTNWAFPWWRSWTRMPTRI*