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13_1_40cm_3_scaffold_15279

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_15279_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13..2112)
DNA (2100bp) protein (700aa)
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Polyribonucleotide nucleotidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PNP_GEMAT
Polyribonucleotide nucleotidyltransferase
13_1_40cm_3_scaffold_15279_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(2198..2383)
DNA (186bp) protein (62aa)
30S ribosomal protein S15 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y2_GEMAT
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribosomal protein S15
13_1_40cm_3_scaffold_15279_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2462..3451
DNA (990bp) protein (330aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y3_GEMAT
13_1_40cm_3_scaffold_15279_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3735..5105)
DNA (1371bp) protein (457aa)
peptidase M50 membrane-associated zinc metallopeptidase; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
rseP; regulator of sigma E protease (EC:3.4.24.-); K11749 regulator of sigma E protease [EC:3.4.24.-] id=14625408 bin=bin7_NC10_sister species=Thioalkalivibrio sp. ALJ24 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
membrane-associated zinc metalloprotease
13_1_40cm_3_scaffold_15279_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5099..6217)
DNA (1119bp) protein (373aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RBG_16_Gemmatimonadetes_66_8_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y7_GEMAT
1-deoxy-D-xylulose 5-phosphate reductoisomerase
13_1_40cm_3_scaffold_15279_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6214..6984)
DNA (771bp) protein (257aa)
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41); K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y8_GEMAT
13_1_40cm_3_scaffold_15279_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7046..7786)
DNA (741bp) protein (247aa)
uppS; UDP pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Isoprenyl transferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y9_GEMAT
Undecaprenyl pyrophosphate synthase
13_1_40cm_3_scaffold_15279_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7788..8342)
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z0_GEMAT
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=GWC2_Gemmatimonadetes_71_10_curated
Ribosome-recycling factor
13_1_40cm_3_scaffold_15279_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8339..9061)
DNA (723bp) protein (241aa)
pyrH; uridylate kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22] Tax=RBG_16_Gemmatimonadetes_66_8_curated
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z1_GEMAT
13_1_40cm_3_scaffold_15279_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9062..9670)
DNA (609bp) protein (203aa)
Elongation factor Ts n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJQ4_THEM7
translation elongation factor Ts (EF-Ts); K02357 elongation factor Ts Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
translation elongation factor Ts (EF-Ts)
13_1_40cm_3_scaffold_15279_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(9760..10083)
DNA (324bp) protein (108aa)
30S ribosomal protein S2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z3_GEMAT
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribosomal protein S2
13_1_40cm_3_scaffold_15279_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(10056..10592)
DNA (537bp) protein (179aa)
30S ribosomal protein S2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z3_GEMAT
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rpsB; 30S ribosomal protein S2
13_1_40cm_3_scaffold_15279_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(10688..11092)
DNA (405bp) protein (135aa)
30S ribosomal protein S9 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS9_GEMAT
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpsI; 30S ribosomal protein S9
13_1_40cm_3_scaffold_15279_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(11089..11538)
DNA (450bp) protein (150aa)
50S ribosomal protein L13 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL13_GEMAT
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rplM; 50S ribosomal protein L13
13_1_40cm_3_scaffold_15279_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11592..12125)
DNA (534bp) protein (178aa)
Biotin carboxyl carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z7_GEMAT
biotin carboxyl carrier protein
Biotin carboxyl carrier protein {ECO:0000313|EMBL:BAH38822.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (s
13_1_40cm_3_scaffold_15279_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12122..13387)
DNA (1266bp) protein (422aa)
hypothetical protein; K00599 [EC:2.1.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z8_GEMAT
(Uracil-5)-methyltransferase
13_1_40cm_3_scaffold_15279_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13384..14220)
DNA (837bp) protein (279aa)
acyl-CoA carboxylase alpha chain (EC:6.4.1.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
acyl-CoA carboxylase alpha chain (EC:6.4.1.-)
Acyl-CoA carboxylase alpha chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z9_GEMAT
Displaying 17 items

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