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13_1_40cm_3_scaffold_8542_4

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: comp(3293..4807)

Top 3 Functional Annotations

Value Algorithm Source
glcD; glycolate oxidase subunit GlcD; K00104 glycolate oxidase [EC:1.1.3.15] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 472.0
  • Bit_score: 663
  • Evalue 2.50e-187
Glycolate oxidase subunit GlcD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y2_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 471.0
  • Bit_score: 560
  • Evalue 2.10e-156
glcD; glycolate oxidase subunit GlcD similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 471.0
  • Bit_score: 560
  • Evalue 5.90e-157

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1515
ATGTCCCATCCGTCTATTGACTCTGCCCTCGAGCCTGCTCTAGCAGGGATCGTCGGTGAGCGCCACGTGCGGGCGGCGCACGCGGAGCGGCTGGCCTACGCGATGGACGGCCTCCCCACGCACCGCTCCCTCCCCGGCCTTGCGGTGCTGCCGGGCACGCGGGACGAGGTGGTCGCCGTGGTTCGCCTGCTCGCCGACCTCGAGGTGCCGTTCGTCCCGCGGGGAGCCGGCACCGGCCTCTCGGGCGGGGCGCTTGCCGACCACGACGCGGTGCTCCTCGTGCTCACCCGGCTGAACCGCATCCTCAAGATCGATGTGGCCAACCGCCTGGCGGTCGTGGAGCCGGGGGTCGTCAACGCGCGCCTCTCGGCGGCAGCCGCGCCGCACCGCCTCCATTACGCGCCCGATCCGTCCAGCCAGACCGCGTGCACCCTCGGCGGCAACGTGGCAGAGAACGCCGGCGGCCCGCACTGTCTCAAGTACGGCGTCACCACCAGCCACATCCTGGCCCTCGAGGTGGTGCGCGGGGACGGCAGCGTGGTGAATCTGGGCAGCCCCGGCGGAGAGCCGTGGGGGCCGGACCTCGTCGGAGTGTTCGTGGGCTCGGAAGGGAACTTCGGGGTGGCGACGCGCATCACCGTGCGGCTCGTGCCGCTGCCGCGCGCGGTGCGCACCCTGCTCGCCGATTTCAGCTCGCTGCGCGCGGCGGGCGAAGCGGTGTCGGCGATCATCGGCGCGGGGCTCGTGCCGGCCGCCCTGGAGATGATGGATCGTTCGTGCATCCAGGCGGTGGAGGACTCGGTGTACGCCGCGGGATATCCGCGCGACGCCGCCGCGGTGCTGCTCGTCGAGCTCGACGGGCGCAGCGAGGCGGCGGTAGACGAGGAGGCGCGCCAGGCGGCGTCCCTGCTCAGCGCCCAGGGCGCCCGCCACGTCCGCCAGGCCGCCGACGCTCGCGAGCGCGAGCGCTTGTGGCAGGGCCGCAAGAAAGCGTTCGGCGCGATGGGACGCCTGTCGCGGGACCTCGTGGTGCAGGACGCGGTCGTCCCGCGCTCGTCGCTCCCGGACGTGCTCGAGTCGATCGCCGGCATCGCCGCCCGCTACGACCTGGTGGTCAGCAACGTCTTCCACGCCGGCGACGGGAACCTCCACCCCAACATCTCGTTCGACGCGCGCGACCCCGAGACCGTCGACCGCGTGGAGCAGGCCAGCGCCGAGATCATGGCCACGTGCATCGCGGCGGGAGGCACCATCACCGGGGAGCACGGCGTGGGGCTCGACAAGCTGCGCTACATGCCCCTGGTGTTCGACGGCGACTCGCTCAGCGCCATGCACGCGGTGCGGCGCGTGTTCGACCCCGGCGAGCGCGTCAACCCCGGCAAGGTCATCCCGGTGCACGCGTGCCGAGAATGGAGCCAGGCGCTTGGAGCTCGTCACGGGTGGGCTAACCCCGCGGCCCCCTCGCTGCGCTCGGGGCCGGCTATGCCGCGGGGGCTCTCGGAGGTCGCCCCATGA
PROTEIN sequence
Length: 505
MSHPSIDSALEPALAGIVGERHVRAAHAERLAYAMDGLPTHRSLPGLAVLPGTRDEVVAVVRLLADLEVPFVPRGAGTGLSGGALADHDAVLLVLTRLNRILKIDVANRLAVVEPGVVNARLSAAAAPHRLHYAPDPSSQTACTLGGNVAENAGGPHCLKYGVTTSHILALEVVRGDGSVVNLGSPGGEPWGPDLVGVFVGSEGNFGVATRITVRLVPLPRAVRTLLADFSSLRAAGEAVSAIIGAGLVPAALEMMDRSCIQAVEDSVYAAGYPRDAAAVLLVELDGRSEAAVDEEARQAASLLSAQGARHVRQAADARERERLWQGRKKAFGAMGRLSRDLVVQDAVVPRSSLPDVLESIAGIAARYDLVVSNVFHAGDGNLHPNISFDARDPETVDRVEQASAEIMATCIAAGGTITGEHGVGLDKLRYMPLVFDGDSLSAMHAVRRVFDPGERVNPGKVIPVHACREWSQALGARHGWANPAAPSLRSGPAMPRGLSEVAP*