ggKbase home page

13_1_40cm_3_scaffold_8542

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_8542_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(28..888)
DNA (861bp) protein (287aa)
Oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22) Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein n=1 Tax=Pseudomonas nitroreducens RepID=UPI0002E6CCCD
putative esterase/lipase
13_1_40cm_3_scaffold_8542_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(885..2144)
DNA (1260bp) protein (420aa)
Glycolate oxidase iron-sulfur subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y0_GEMAT rbh
protein of unknown function DUF224 cysteine-rich region domain protein
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_8542_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2141..2800)
DNA (660bp) protein (220aa)
glcE; glycolate oxidase subunit Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_8542_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3293..4807)
DNA (1515bp) protein (505aa)
glcD; glycolate oxidase subunit GlcD; K00104 glycolate oxidase [EC:1.1.3.15] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Glycolate oxidase subunit GlcD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y2_GEMAT
glcD; glycolate oxidase subunit GlcD
13_1_40cm_3_scaffold_8542_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4931..5824)
DNA (894bp) protein (298aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y4_GEMAT rbh
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor
13_1_40cm_3_scaffold_8542_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6041..7147)
DNA (1107bp) protein (369aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-dehydroquinate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y5_GEMAT rbh
3-dehydroquinate synthase
13_1_40cm_3_scaffold_8542_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7141..7689)
DNA (549bp) protein (183aa)
ATP/cobalamin adenosyltransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J663_ANAD2
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ATP/cobalamin adenosyltransferase
13_1_40cm_3_scaffold_8542_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7773..8060
DNA (288bp) protein (96aa)
putative oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
Ferredoxin--NADP reductase n=1 Tax=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) RepID=FENR_THET8
thioredoxin reductase
Displaying 8 items

View Taxonomy