ggKbase home page

13_1_40cm_3_scaffold_9459_12

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: comp(11318..13657)

Top 3 Functional Annotations

Value Algorithm Source
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 766.0
  • Bit_score: 1034
  • Evalue 0.0
topA; DNA topoisomerase I (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 813.0
  • Bit_score: 874
  • Evalue 2.90e-251
DNA topoisomerase 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE5_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 813.0
  • Bit_score: 874
  • Evalue 1.00e-250

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 2340
GTGGCTGCTAAGAAGAGCGTCGTGAAGAAAGCGAAAGCGCCGAAAGCGGCGAAGACGCGGAAGCCGAAGGCCGTGGCGCCGGAGGCGCGGGCGGCGAAGCGGAGCGCGAAGGGCGGGACCTCGCTCGTCATCGTGGAGTCGCCGGCCAAGGCCCGCACCATCGGGAAGTACCTCGGCCGCGGCTATACCGTCAAAGCGACGGTGGGCCACGTCCGCGACCTCCCCAAGCGCGAGCTCGGCGTGGACGTCGAGCACGGCTTCACGCCGAAATACGTCACCATCAAGGAAAAGGCGAAGACGCTCGCGGAGATCAAGAAAGCGGCCAAGCAGTCGGACCGCGTGCTGATCGCGACCGACCCGGACCGCGAGGGCGAGGCGATCGCCTGGCACGTCGCCGACCAGATCGGCAACGGCGGGGCGGTGCGGCGGGTGCTGTTCCACGAGATCACCAAGGACGCGGTGCAGGCGGCGCTGGCGCATCCCCAGGACATCGATCGTCGCAAGGTGGACGCCCAGCAGGCGCGGCGCGTGCTGGACCGGCTGGTCGGCTACAAGGCGTCGCCGCTCCTGTGGAAGACCGTCGCCCTGCGCCTGATCTGCGAGCGCGAGGAGGAGATCCGCCGCTTCGTGCCGCAGGAGTACTGGACCATCGAGGCCGACCTCGAGAAGGATGGCCAGGCGTTCCAGGCGCGGCTTCACAAGGTCGAGGGCCACAAGCCCGACGTGCGCACCGAGGCGGCGGCGCGGGCCATCGTGGACGAGGCGCGGGGGATCCCGTTCGTCGTGGCGGAGGTGGAGCGCGGTGAGAAGCGCCGCAAGGCGCCCGCGCCGTTCACGACCAGCACCATGCAACAGGAAGCGGCGAAGCAGCTGGGGTTCTCGGCGGCGCGGACGATGCGCGCCGCGCAGCAGCTGTACGAAGGCGTGGAAATCGGCGAAGAGGGGCCCGTGGGGCTGATCACCTACATGCGCACCGACTCGGTGCGGGTCGCCGACAGCGCGGTCGCTCAGGCGCGGGAATTCATCGCCGCCAACTTCGACGCGAAGTACCTGCCGGCCGAGCCCAACGTGTACAAGAGCGGCCGCGGTGGGAGCAAGGTGCAGGACGCCCACGAGGCCATCCGCCCCACGGACGTGTCGCGGCGGCCGGAAGCGCTCAAGAAGCACCTCCAGACCGACCAGTTCAAGCTCTACCAGCTGGTGTGGCGACGCTTCGTCGCCTCCCAGATGAGCCCGGCGATCTACGAGGCGACGAAAGTCGACTTCACGGTGGGCCGCTACGTGTTCCGGGCGACCGGCTCACGGGTGCTGTTCGACGGCTATCACGTGCTCTACCACGAGGTGCACGAGCCGGAGGAAGGCAAGACGCTCGACGACCTGGCCCCGATCCCCCTGCTCGCGGCCGGCGACCGCGTGACGGTGCGGCAGATCACCCCGACCCAGCACTTCACCGAGCCACCGCCGCGGTTCAGCGAGGCCAGCCTGGTGAAGGAGCTGGAGCGGCTCGGCATCGGCCGGCCCTCGACGTATGCGGCCATCATCCAGACCCTCAGGGCGCGCTGGTACGCCACGGCGAAGGACCGCCGCTTCCACCCGACGCCGCAGGGCGAGCAGGTGTGGAAGGTGATGAAGCGTTGCTTCCCCGAGGTGTTCGACGTGGGGTTCACGGCCCAGATGGAGGCCGAGCTCGACAAGATTGAGGACGGCGATCTCAAATGGCAGCAGGTACTCGGCGAGTTCTGGTCGCCGTTCTCCAAGGCGCTCGAGGCCGTGGACGTGCAGGAGCTGATTCACGCCGTGCACGATCTCTCGAAGCTGTCCGAGGAGCGTTGCCCCGTGTGCGGCGGGCCGGTGGAACTGCGCAGTGGCCGCTTCGGGCCGTTCATCGCCTGCGCCAAGTACCCCGACGGCTGCACGTTCAGCCGCTCGATCAACAAGGACAAGGTGCCCGACCGGCCCACCGACGAGATCTGCAAGGAGTGCGGCTCGCCGATGGTCATCAAGACGGGGCGGTTCGGGGAGTTCCTCGCCTGCACGCGGTACCCGAAGTGCAAGCACACGCGGCCGGTGCCGCTGGGGATCAAGTGCCCCAAGTGCGGCATCGGCGACCTGGCCGAGCGGCGCACGCGCAAGGGACGCAACTTCTTTGGGTGCCTGCGGTATCCGGACTGCGACTACTCGGTGTGGAACAAGCCGGTGGCCGTGGCGTGCCCGAGCTGCGGGTTCGTGGGGCTGGAAGTGAAGCGGACCAAGGAGGCTGGGGTCGTACACAAGTGCCTCAAGTGCGGACACGAAGTCCCGGTGGAGGAGCCCGCGCCCACGGAGCCGGTCGCGACCTGA
PROTEIN sequence
Length: 780
VAAKKSVVKKAKAPKAAKTRKPKAVAPEARAAKRSAKGGTSLVIVESPAKARTIGKYLGRGYTVKATVGHVRDLPKRELGVDVEHGFTPKYVTIKEKAKTLAEIKKAAKQSDRVLIATDPDREGEAIAWHVADQIGNGGAVRRVLFHEITKDAVQAALAHPQDIDRRKVDAQQARRVLDRLVGYKASPLLWKTVALRLICEREEEIRRFVPQEYWTIEADLEKDGQAFQARLHKVEGHKPDVRTEAAARAIVDEARGIPFVVAEVERGEKRRKAPAPFTTSTMQQEAAKQLGFSAARTMRAAQQLYEGVEIGEEGPVGLITYMRTDSVRVADSAVAQAREFIAANFDAKYLPAEPNVYKSGRGGSKVQDAHEAIRPTDVSRRPEALKKHLQTDQFKLYQLVWRRFVASQMSPAIYEATKVDFTVGRYVFRATGSRVLFDGYHVLYHEVHEPEEGKTLDDLAPIPLLAAGDRVTVRQITPTQHFTEPPPRFSEASLVKELERLGIGRPSTYAAIIQTLRARWYATAKDRRFHPTPQGEQVWKVMKRCFPEVFDVGFTAQMEAELDKIEDGDLKWQQVLGEFWSPFSKALEAVDVQELIHAVHDLSKLSEERCPVCGGPVELRSGRFGPFIACAKYPDGCTFSRSINKDKVPDRPTDEICKECGSPMVIKTGRFGEFLACTRYPKCKHTRPVPLGIKCPKCGIGDLAERRTRKGRNFFGCLRYPDCDYSVWNKPVAVACPSCGFVGLEVKRTKEAGVVHKCLKCGHEVPVEEPAPTEPVAT*