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13_1_40cm_3_scaffold_9459

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_9459_1

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comp(1..312)
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO11297.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Two component system response regulator id=2315011 bin=GWA2_Elusimicrobia_56_46 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
DNA-binding response regulator
13_1_40cm_3_scaffold_9459_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(421..1164)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_3_scaffold_9459_3
GWC2_SYX_53_9_curated, Bacteria

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comp(1166..2863)
DNA (1698bp) protein (566aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RHS4_MOOTA
putative PAS/PAC sensor protein Tax=GWC2_SYX_53_9_curated
sigma-54 dependent trancsriptional regulator
13_1_40cm_3_scaffold_9459_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2937..4433)
DNA (1497bp) protein (499aa)
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD4_GEMAT
putative NtrC family two-component response regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
sigma-54 factor interaction domain-containing protein
13_1_40cm_3_scaffold_9459_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4447..4929)
DNA (483bp) protein (161aa)
Molybdopterin adenylyltransferase n=1 Tax=Desulfomonile tiedjei DSM 6799 RepID=I4C9J9_9DELT id=1244890 bin=RBG9 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG9 organism_group=Chloroflexi
moaB; Molybdopterin adenylyltransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
molybdenum cofactor synthesis domain protein
13_1_40cm_3_scaffold_9459_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4999..6030)
DNA (1032bp) protein (344aa)
gcvT; aminomethyltransferase (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Aminomethyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD5_GEMAT
Aminomethyltransferase
13_1_40cm_3_scaffold_9459_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(6075..6974)
DNA (900bp) protein (300aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3) Tax=RBG_16_Gemmatimonadetes_66_8_curated
Ornithine carbamoyltransferase, catabolic n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD7_GEMAT
Ornithine carbamoyltransferase
13_1_40cm_3_scaffold_9459_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7051..8541)
DNA (1491bp) protein (497aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD9_GEMAT
hslU; ATP-dependent Hsl protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ATP-dependent hsl protease ATP-binding subunit hslU
13_1_40cm_3_scaffold_9459_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8544..9077)
DNA (534bp) protein (178aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=861299 specie
ATP-dependent protease subunit HslV n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=HSLV_GEMAT
ATP-dependent protease hslV
13_1_40cm_3_scaffold_9459_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9091..9996)
DNA (906bp) protein (302aa)
Tyrosine recombinase XerC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE3_GEMAT
xerC; tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tyrosine recombinase xerC
13_1_40cm_3_scaffold_9459_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9993..11231)
DNA (1239bp) protein (413aa)
gid; tRNA uridine 5-carboxymethylaminomethyl modification enzyme Gid; K04094 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_c
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE4_GEMAT
gid; tRNA uridine 5-carboxymethylaminomethyl modification enzyme Gid
13_1_40cm_3_scaffold_9459_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11318..13657)
DNA (2340bp) protein (780aa)
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE5_GEMAT
Displaying 12 items

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