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13_1_40cm_3_scaffold_1268

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1268_1
GWF1_OP11_46_13, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(2..295)
DNA (294bp) protein (98aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:KKU22731.1}; TaxID=1618602 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacteri
13_1_40cm_3_scaffold_1268_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(360..1487)
DNA (1128bp) protein (376aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
13_1_40cm_3_scaffold_1268_3

Not on your lists

comp(1484..2581)
DNA (1098bp) protein (366aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM95888.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_3_scaffold_1268_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2621..3808
DNA (1188bp) protein (396aa)
glycosyltransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
glycosyltransferase id=12557116 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycosyltransferase-like protein
13_1_40cm_3_scaffold_1268_5
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

3828..5213
DNA (1386bp) protein (462aa)
Glycosyl transferase family 39 id=5005798 bin=GWA2_Elusi_like_61_42 species=Microcoleus vaginatus genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
Tax=RBG_16_Chloroflexi_64_43_curated
13_1_40cm_3_scaffold_1268_6

Not on your lists

comp(5170..5958)
DNA (789bp) protein (263aa)
Formyl transferase-like protein
Formyl transferase-like protein {ECO:0000313|EMBL:AJF60160.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Formyl transferase-like id=5241169 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_1_40cm_3_scaffold_1268_7
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5955..6866)
DNA (912bp) protein (304aa)
Polysaccharide deacetylase domain-containing protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CP29_MYXFH
Polysaccharide deacetylase {ECO:0000313|EMBL:AKF80404.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myx
polysaccharide deacetylase domain-containing protein
13_1_40cm_3_scaffold_1268_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(6866..7261)
DNA (396bp) protein (132aa)
amine oxidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
BarJ id=2888353 bin=GWC1_CPR2_39_9 species=Oscillatoria sp. PCC 6506 genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
protoporphyrinogen oxidase
13_1_40cm_3_scaffold_1268_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(7206..8168)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6M5_9BACT
amine oxidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_40cm_3_scaffold_1268_10
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(8248..8898)
DNA (651bp) protein (217aa)
type 11 methyltransferase Tax=RBG_16_Planctomycetes_59_8_curated
Methyltransferase type 11 id=5800021 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
type 11 methyltransferase
13_1_40cm_3_scaffold_1268_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(8876..9820)
DNA (945bp) protein (315aa)
nucleotide sugar epimerase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_3_scaffold_1268_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(9817..10884)
DNA (1068bp) protein (356aa)
rffG1; dTDP-glucose 4,6-dehydratase 2 (EC:4.2.1.46) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
NAD-dependent epimerase/dehydratase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LIQ8_HALO1
NAD-dependent epimerase/dehydratase
13_1_40cm_3_scaffold_1268_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(11008..11649)
DNA (642bp) protein (214aa)
MarR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Putative transcriptional regulator, AsnC family id=2250628 bin=GWA2_Elusimicrobia_69_24 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
MarR family transcriptional regulator
13_1_40cm_3_scaffold_1268_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(11682..12392)
DNA (711bp) protein (237aa)
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43); K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003628D67
13_1_40cm_3_scaffold_1268_15
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(12389..13429)
DNA (1041bp) protein (347aa)
N-acetylneuraminate synthase (EC:2.5.1.56); K01654 N-acetylneuraminate synthase [EC:2.5.1.56] Tax=GWF2_WOR_2_43_52_curated
putative n-acetylneuraminate synthase (EC:2.5.1.56)
N-acetylneuraminate synthase id=4686004 bin=GWC2_OP3_44_8 species=Methanococcus aeolicus genus=Methanococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52 rbh
13_1_40cm_3_scaffold_1268_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(13429..14118)
DNA (690bp) protein (230aa)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EAT2_9FLAO
UDP-N-acetylglucosamine 2-epimerase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
UDP-N-acetylglucosamine 2-epimerase
13_1_40cm_3_scaffold_1268_17
unknown

Not on your lists

14186..14410
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_3_scaffold_1268_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(14664..16154)
DNA (1491bp) protein (497aa)
aldehyde dehydrogenase (EC:1.2.1.3); K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
aldehyde dehydrogenase (EC:1.2.1.3)
NAD-dependent aldehyde dehydrogenase id=2619814 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan rbh
13_1_40cm_3_scaffold_1268_19
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(16325..18271)
DNA (1947bp) protein (649aa)
transketolase; K00615 transketolase [EC:2.2.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Transketolase id=2619808 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan rbh
transketolase
13_1_40cm_3_scaffold_1268_20
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(18373..19194)
DNA (822bp) protein (274aa)
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Oxidoreductase, short chain dehydrogenase/reductase family protein id=2619819 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan rbh
oxidoreductase, short chain dehydrogenase
13_1_40cm_3_scaffold_1268_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(19476..20819)
DNA (1344bp) protein (448aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K13015 UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036749FB rbh
13_1_40cm_3_scaffold_1268_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(20844..21836)
DNA (993bp) protein (331aa)
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] id=12555648 bin=CNBR_ACIDO species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
13_1_40cm_3_scaffold_1268_23
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

21861..22952
DNA (1092bp) protein (364aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
metW; Methionine biosynthesis protein MetW id=12555641 bin=CNBR_ACIDO species=Methanocella conradii genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_3_scaffold_1268_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23239..24324
DNA (1086bp) protein (362aa)
FAD-dependent oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
FAD dependent oxidoreductase id=4270917 bin=GWA2_Elusimicrobia_69_24 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
FAD dependent oxidoreductase
13_1_40cm_3_scaffold_1268_25
unknown

Not on your lists

comp(25237..25563)
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_3_scaffold_1268_26
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26294..26851)
DNA (558bp) protein (186aa)
cell wall biosynthesis glycosyltransferase (EC:2.4.1.83); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=GWC2_Geobacteraceae_58_44_curated
cell wall biosynthesis glycosyltransferase (EC:2.4.1.83)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKB3_CHLTF
13_1_40cm_3_scaffold_1268_27
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(27017..28084)
DNA (1068bp) protein (356aa)
nucleoside-diphosphate-sugar epimerase (EC:5.1.3.10)
NAD-dependent epimerase/dehydratase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKS7_9BACT
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EEF59570.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;"
13_1_40cm_3_scaffold_1268_28
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28084..29145)
DNA (1062bp) protein (354aa)
NAD-dependent epimerase/dehydratase; K12454 CDP-paratose 2-epimerase [EC:5.1.3.10] Tax=GWC2_Geobacteraceae_53_11_curated
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKB1_CHLTF
nucleoside-diphosphate-sugar epimerase
13_1_40cm_3_scaffold_1268_29
unknown

Not on your lists

comp(29149..31068)
DNA (1920bp) protein (640aa)

This feature has no annotations

13_1_40cm_3_scaffold_1268_30
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

31380..31511
DNA (132bp) protein (44aa)
uncharacterized protein containing a von Willebrand factor type A (vWA) domain Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying items 1-30 of 35 in total

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