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13_1_40cm_3_scaffold_10928

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_10928_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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1..369
DNA (369bp) protein (123aa)
Probable transcriptional regulatory protein n=1 Tax=uncultured Acidobacteriales bacterium HF0200_23L05 RepID=E0XUJ1_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_3_scaffold_10928_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

366..896
DNA (531bp) protein (177aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ruvC; Holliday junction resolvase (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] id=12554567 bin=CNBR_ACIDO species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
13_1_40cm_3_scaffold_10928_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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893..1495
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase ruvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=uncultured Acidobacteriales bacterium HF0200_23L05 RepID=E0XUI8_9BACT
ruvA; Holliday junction DNA helicase RuvA
13_1_40cm_3_scaffold_10928_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

1520..2548
DNA (1029bp) protein (343aa)
ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=uncultured Acidobacteriales bacterium HF0200_23L05 RepID=E0XUI7_9BACT rbh
ruvB; Holliday junction DNA helicase RuvB
13_1_40cm_3_scaffold_10928_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2611..3564
DNA (954bp) protein (318aa)
fabH; 3-oxoacyl-ACP synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=uncultured Acidobacteriales bacterium HF0200_23L05 RepID=E0XUI6_9BACT rbh
3-oxoacyl-(acyl-carrier-protein) synthase III
13_1_40cm_3_scaffold_10928_6
unknown

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comp(3845..4048)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_3_scaffold_10928_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4240..4701
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAH3_ANADF
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_3_scaffold_10928_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4683..5618
DNA (936bp) protein (312aa)
hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WD4_SOLUE
hypothetical protein
13_1_40cm_3_scaffold_10928_9
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5788..6156)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI0003748E0A
transport protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
hypothetical protein
13_1_40cm_3_scaffold_10928_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(6153..7046)
DNA (894bp) protein (298aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=mine drainage metagenome RepID=E6PXU8_9ZZZZ
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_3_scaffold_10928_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7360..9057
DNA (1698bp) protein (566aa)
peptidase S8 and S53 subtilisin kexin sedolisin Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
subtilisin-like serine protease id=12555736 bin=CNBR_ACIDO species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase S8 and S53 subtilisin kexin sedolisin
Displaying 11 items

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