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13_1_40cm_3_scaffold_12122

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_12122_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(3..608)
DNA (606bp) protein (202aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] id=14425196 bin=bin1_lowGC species=Clostridium sp. CAG:264 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
3-dehydroquinate synthase
13_1_40cm_3_scaffold_12122_2
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(605..1135)
DNA (531bp) protein (177aa)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QDE6_9FIRM
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:EKP94696.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;"
ATP/cobalamin adenosyltransferase
13_1_40cm_3_scaffold_12122_3
unknown

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comp(1151..1942)
DNA (792bp) protein (264aa)

This feature has no annotations

13_1_40cm_3_scaffold_12122_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2048..3070
DNA (1023bp) protein (341aa)
putative oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
Ferredoxin--NADP reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y7_GEMAT
putative oxidoreductase
13_1_40cm_3_scaffold_12122_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(3067..4560)
DNA (1494bp) protein (498aa)
D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Gemmati
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJV1_RHOM4
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase
13_1_40cm_3_scaffold_12122_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4526..5443)
DNA (918bp) protein (306aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y8_GEMAT
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG90077.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_12122_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5443..6393)
DNA (951bp) protein (317aa)
Putative ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y9_GEMAT
ABC-type transporter, periplasmic subunit
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AHG90078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_12122_8
unknown

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6450..6899
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_3_scaffold_12122_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6922..9033
DNA (2112bp) protein (704aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z0_GEMAT
surface antigen; K07277 outer membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
surface antigen (D15)
Displaying 9 items

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