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13_1_40cm_3_scaffold_10481

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_10481_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists


3..260
DNA (258bp) protein (86aa)
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=12555568 bin=CNBR_ACIDO species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplX; 50S ribosomal protein L24
13_1_40cm_3_scaffold_10481_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists


257..802
DNA (546bp) protein (182aa)
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=12555567 bin=CNBR_ACIDO species=Bacillus clausii genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplE; 50S ribosomal protein L5
13_1_40cm_3_scaffold_10481_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


904..1089
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003822EB2
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
30S ribosomal protein S14
13_1_40cm_3_scaffold_10481_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


1117..1527
DNA (411bp) protein (137aa)
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=12555565 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsH; 30S ribosomal protein S8
13_1_40cm_3_scaffold_10481_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists


1618..2157
DNA (540bp) protein (180aa)
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=12555564 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplF; 50S ribosomal protein L6
13_1_40cm_3_scaffold_10481_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists


2375..2749
DNA (375bp) protein (125aa)
50S ribosomal protein L18 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 id=12555563 bin=CNBR_ACIDO species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L18
13_1_40cm_3_scaffold_10481_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


2866..3384
DNA (519bp) protein (173aa)
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=12555562 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
30S ribosomal protein S5
13_1_40cm_3_scaffold_10481_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


3399..3608
DNA (210bp) protein (70aa)
50S ribosomal protein L30 n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLN4_NEPCE
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ribosomal protein L30
13_1_40cm_3_scaffold_10481_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


3679..3957
DNA (279bp) protein (93aa)
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 id=12555560 bin=CNBR_ACIDO species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
LSU ribosomal protein L15p (L27Ae)
13_1_40cm_3_scaffold_10481_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists


4070..5458
DNA (1389bp) protein (463aa)
protein translocase subunit SecY/sec61 alpha; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
protein translocase subunit SecY/sec61 alpha; K03076 preprotein translocase subunit SecY id=12555559 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein translocase subunit SecY/sec61 alpha
13_1_40cm_3_scaffold_10481_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

5529..6317
DNA (789bp) protein (263aa)
adk; adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] id=12555558 bin=CNBR_ACIDO species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
adk; adenylate kinase (EC:2.7.4.3)
13_1_40cm_3_scaffold_10481_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

6314..7084
DNA (771bp) protein (257aa)
methionine aminopeptidase, type I; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
methionine aminopeptidase n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037DAA45
methionine aminopeptidase
13_1_40cm_3_scaffold_10481_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7042..7272
DNA (231bp) protein (77aa)
Translation initiation factor IF-1 n=8 Tax=Xylella fastidiosa RepID=IF1_XYLFT
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
infA; translation initiation factor IF-1
13_1_40cm_3_scaffold_10481_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists


7494..7868
DNA (375bp) protein (125aa)
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=12555554 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
30S ribosomal protein S13
13_1_40cm_3_scaffold_10481_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


7872..8327
DNA (456bp) protein (152aa)
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 id=12555553 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
30S ribosomal protein S11
13_1_40cm_3_scaffold_10481_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


8377..9006
DNA (630bp) protein (210aa)
30S ribosomal protein S4 n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M2E5_CLOCD
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
30S ribosomal protein S4
13_1_40cm_3_scaffold_10481_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9200..10186
DNA (987bp) protein (329aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) id=12555552 bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
DNA-directed RNA polymerase subunit alpha
13_1_40cm_3_scaffold_10481_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


10249..10866
DNA (618bp) protein (206aa)
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
50S ribosomal protein L17 id=12555551 bin=CNBR_ACIDO species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplQ; 50S ribosomal protein L17
13_1_40cm_3_scaffold_10481_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(11106..12119)
DNA (1014bp) protein (338aa)
Lytic transglycosylase catalytic n=1 Tax=uncultured bacterium 246 RepID=E3T6F3_9BACT
translation elongation factor 2 (EF-2/EF-G); K02355 elongation factor G Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
translation elongation factor G
13_1_40cm_3_scaffold_10481_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(12074..13159)
DNA (1086bp) protein (362aa)
Elongation factor EF-G n=1 Tax=uncultured Acidobacteria bacterium RepID=H5S9F7_9BACT
translation elongation factor G; K02355 elongation factor G Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
translation elongation factor G
13_1_40cm_3_scaffold_10481_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13294..13695)
DNA (402bp) protein (134aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
macB10; putative ABC transporter permease; K02004 putative ABC transport system permease protein id=12555549 bin=CNBR_ACIDO species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Displaying 21 items

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