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13_1_40cm_3_scaffold_12372

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_12372_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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3..401
DNA (399bp) protein (133aa)
translation elongation factor P; K02356 elongation factor P Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
translation elongation factor P; K02356 elongation factor P id=12557288 bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
translation elongation factor P
13_1_40cm_3_scaffold_12372_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

429..3683
DNA (3255bp) protein (1085aa)
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein id=24418766 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
13_1_40cm_3_scaffold_12372_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(4044..4568)
DNA (525bp) protein (175aa)
Peptidase M1, membrane alanine aminopeptidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024M7_SOLUE
peptidase M1, membrane alanine aminopeptidase
Peptidase M1, membrane alanine aminopeptidase {ECO:0000313|EMBL:ABJ83549.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus
13_1_40cm_3_scaffold_12372_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(4565..5620)
DNA (1056bp) protein (352aa)
Peptidase M1, membrane alanine aminopeptidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024M7_SOLUE rbh
peptidase M1, membrane alanine aminopeptidase
Peptidase M1, membrane alanine aminopeptidase {ECO:0000313|EMBL:ABJ83549.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus
13_1_40cm_3_scaffold_12372_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(5748..6329)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Geobacter sp. (strain FRC-32) RepID=B9M8V0_GEOSF id=5225900 bin=16ft_combo_ws3_JS1 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_1_40cm_3_scaffold_12372_6
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6503..8086)
DNA (1584bp) protein (528aa)
ATP dependent DNA helicase RecG n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q415_METSZ rbh
Divergent AAA domain protein {ECO:0000313|EMBL:AID31932.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
ATP dependent DNA helicase RecG
13_1_40cm_3_scaffold_12372_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8334..8744)
DNA (411bp) protein (137aa)
CAAX amino terminal protease family protein n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8HK28_ACACA id=5224343 bin=16ft_combo_ws3_JS1 species=Acanthamoeba castellanii genus=Acanthamoeba taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
CAAX amino terminal protease family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 7 items

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