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13_1_40cm_3_scaffold_12526

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_12526_1
unknown

Not on your lists

comp(36..455)
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_40cm_3_scaffold_12526_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(542..742)
DNA (201bp) protein (67aa)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] id=12554057 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
guaA; GMP synthase
13_1_40cm_3_scaffold_12526_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(742..2061)
DNA (1320bp) protein (440aa)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] id=12554057 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
guaA; GMP synthase (EC:6.3.5.2)
13_1_40cm_3_scaffold_12526_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2264..3415
DNA (1152bp) protein (384aa)
Pyrrolo-quinoline quinone n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QGS3_SPILD
serine/threonine protein kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
pyrrolo-quinoline quinone
13_1_40cm_3_scaffold_12526_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3562..3963)
DNA (402bp) protein (134aa)
Multiple substrate aminotransferase n=1 Tax=uncultured bacterium RepID=F8UVV4_9BACT
aminotransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
GntR family transcriptional regulator
13_1_40cm_3_scaffold_12526_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3920..4972)
DNA (1053bp) protein (351aa)
id=12554055 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
id=12554055 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_12526_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

5143..6240
DNA (1098bp) protein (366aa)
sensory transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_3_scaffold_12526_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6188..6688
DNA (501bp) protein (167aa)
sensory transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_3_scaffold_12526_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6792..8960
DNA (2169bp) protein (723aa)
histidine kinase (EC:2.7.13.3) id=12554054 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sensory transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
histidine kinase
13_1_40cm_3_scaffold_12526_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9081..10928)
DNA (1848bp) protein (616aa)
Polyvinyl-alcohol dehydrogenase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D3P4_BRAJP
polyvinyl-alcohol dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
cytochrome Cbb3
13_1_40cm_3_scaffold_12526_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10994..11839)
DNA (846bp) protein (282aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
pssA; phosphatidylserine synthase id=12554053 bin=CNBR_ACIDO species=Azotobacter vinelandii genus=Azotobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
CDP-diacylglycerol/serine O-phosphatidyltransferase
13_1_40cm_3_scaffold_12526_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11870..12496)
DNA (627bp) protein (209aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
phosphatidylserine decarboxylase (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] id=12554052 bin=CNBR_ACIDO species=Janibacter sp. HTCC2649 genus=Janibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
13_1_40cm_3_scaffold_12526_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12567..12794)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP38_KORVE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_3_scaffold_12526_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12972..13451)
DNA (480bp) protein (160aa)
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ribosomal-protein-alanine acetyltransferase; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] id=12554051 bin=CNBR_ACIDO species=Collinsella aerofaciens genus=Collinsella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rimI; putative ribosomal-protein-alanine acetyltransferase RimI (EC:2.3.1.128)
Displaying 14 items

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