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13_1_40cm_3_scaffold_12530

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_12530_1
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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744..1382
DNA (639bp) protein (213aa)
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
(2Fe-2S)-binding domain protein id=3729521 bin=GWF2_Methylomirabilis_70_14 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
13_1_40cm_3_scaffold_12530_2
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1389..3665
DNA (2277bp) protein (759aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RBG_16_Betaproteobacteria_66_20_curated
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein id=14627888 bin=bin7_NC10_sister species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_1_40cm_3_scaffold_12530_3
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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3764..4978
DNA (1215bp) protein (405aa)
UniRef90_D6U5B8 Molybdopterin dehydrogenase FAD-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5B8_9CHLR id=1247860 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
13_1_40cm_3_scaffold_12530_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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comp(5794..6621)
DNA (828bp) protein (276aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4); K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
deoxyribose-phosphate aldolase (EC:4.1.2.4); K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4] id=12555944 bin=CNBR_ACIDO species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
deoxyribose-phosphate aldolase
13_1_40cm_3_scaffold_12530_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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comp(6820..7449)
DNA (630bp) protein (210aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] id=12555943 bin=CNBR_ACIDO species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribose-5-phosphate isomerase B Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
ribose-5-phosphate isomerase B
13_1_40cm_3_scaffold_12530_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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7470..7994
DNA (525bp) protein (175aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8); K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypoxanthine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] id=12555942 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
13_1_40cm_3_scaffold_12530_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

9443..10081
DNA (639bp) protein (213aa)
uracil phosphoribosyltransferase; K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
uracil phosphoribosyltransferase; K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] id=12555941 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
13_1_40cm_3_scaffold_12530_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

10116..10958
DNA (843bp) protein (281aa)
Citrate synthase; K01647 citrate synthase [EC:2.3.3.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI00035C70FB
Citrate synthase
13_1_40cm_3_scaffold_12530_9
unknown

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11079..11237
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying 9 items

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