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13_1_40cm_3_scaffold_14280

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_14280_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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1..891
DNA (891bp) protein (297aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022E4_SOLUE
13_1_40cm_3_scaffold_14280_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

888..2414
DNA (1527bp) protein (509aa)
uroporphyrin-III C-methyltransferase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hemD; uroporphyrinogen III C2,C7-methyltransferase and uroporphyrinogen III synthase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] id=12556696 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
uroporphyrin-III C-methyltransferase
13_1_40cm_3_scaffold_14280_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

2411..3406
DNA (996bp) protein (332aa)
HemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
delta-aminolevulinic acid dehydratase; K01698 porphobilinogen synthase [EC:4.2.1.24] id=15193492 bin=GWC2_NOV_55_46 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
13_1_40cm_3_scaffold_14280_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

4359..4904
DNA (546bp) protein (182aa)
glutamate-1-semialdehyde-2,1-aminomutase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4R7_SPHTD
glutamate-1-semialdehyde-2,1-aminomutase
13_1_40cm_3_scaffold_14280_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(4989..5672)
DNA (684bp) protein (228aa)
phophoslipid binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein id=12554810 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phophoslipid binding protein
13_1_40cm_3_scaffold_14280_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6002..7324)
DNA (1323bp) protein (441aa)
peptidase M50, membrane-associated zinc metallopeptidase; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] id=12556749 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
peptidase M50, membrane-associated zinc metallopeptidase
13_1_40cm_3_scaffold_14280_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7329..8564)
DNA (1236bp) protein (412aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] id=12556750 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
1-deoxy-D-xylulose 5-phosphate reductoisomerase
13_1_40cm_3_scaffold_14280_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8631..8993)
DNA (363bp) protein (121aa)
cdsA; phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] id=12556751 bin=CNBR_ACIDO species=Thioalkalivibrio sp. ALJ24 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
13_1_40cm_3_scaffold_14280_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(9468..9848)
DNA (381bp) protein (127aa)
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] id=12556752 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Displaying 9 items

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