ggKbase home page

13_1_40cm_3_scaffold_1618

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1618_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2..817
DNA (816bp) protein (272aa)
Amino acid permease-associated region n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NGU4_ROSCS
amino acid permease-associated protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
amino acid permease
13_1_40cm_3_scaffold_1618_2
unknown

Not on your lists

comp(786..2000)
DNA (1215bp) protein (405aa)

This feature has no annotations

13_1_40cm_3_scaffold_1618_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2296..3006
DNA (711bp) protein (237aa)
Response regulator receiver n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HY28_AZOC5
response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain); K07667 two-component system, OmpR family, KDP operon response regulator KdpE Tax=RIFCSPLOWO2_02_FULL_Acidobacter
response regulator receiver
13_1_40cm_3_scaffold_1618_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3092..6466
DNA (3375bp) protein (1125aa)
Mg2+ transporter MgtE n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DL62_SINAD
Magnesium transporter Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Mg2+ transporter MgtE
13_1_40cm_3_scaffold_1618_5
unknown

Not on your lists

comp(6600..6869)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_3_scaffold_1618_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7003..7839
DNA (837bp) protein (279aa)
Amino acid transporters n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XN7_SOLUE
amino acid transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
amino acid transporter
13_1_40cm_3_scaffold_1618_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7836..9164
DNA (1329bp) protein (443aa)
Amino acid transporters n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XN7_SOLUE
amino acid transporter Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
amino acid transporter
13_1_40cm_3_scaffold_1618_8
unknown

Not on your lists

9335..9469
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_3_scaffold_1618_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9529..11061
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8U0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43922.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_1618_10
unknown

Not on your lists

11069..11167
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_40cm_3_scaffold_1618_11
unknown

Not on your lists

11164..11253
DNA (90bp) protein (30aa)

This feature has no annotations

13_1_40cm_3_scaffold_1618_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11390..13120
DNA (1731bp) protein (577aa)
Potassium-transporting ATPase A chain {ECO:0000255|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000255|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000255|HAMAP-Rule:M
Potassium-transporting ATPase A chain n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=ATKA_KORVE
potassium-transporting ATPase subunit A
13_1_40cm_3_scaffold_1618_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13120..15183
DNA (2064bp) protein (688aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase B chain n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUD4_KORVE
potassium-transporting ATPase subunit B
13_1_40cm_3_scaffold_1618_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15295..15873
DNA (579bp) protein (193aa)
Potassium-transporting ATPase C chain {ECO:0000255|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000255|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000255|HAMAP-Rule:M
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003695D08
potassium-transporting ATPase subunit C
13_1_40cm_3_scaffold_1618_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15870..17012
DNA (1143bp) protein (381aa)
Osmosensitive K+ channel His kinase sensor {ECO:0000313|EMBL:CDM65470.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CDM65470.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrino
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003641EF7 rbh
osmosensitive K+ channel His kinase sensor domain/universal stress family protein
13_1_40cm_3_scaffold_1618_16
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17141..17590
DNA (450bp) protein (150aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XUD7_9PROT
deoxyuridine 5'-triphosphate nucleotidohydrolase
13_1_40cm_3_scaffold_1618_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

17734..18276
DNA (543bp) protein (181aa)
MerR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
MerR family transcriptional regulator id=12556954 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
MerR family transcriptional regulator
Displaying 17 items

View Taxonomy