ggKbase home page

13_1_40cm_3_scaffold_1546

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1546_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1..741
DNA (741bp) protein (247aa)
Threo-3-hydroxyaspartate ammonia-lyase (EC:4.3.1.16); K01754 threonine dehydratase [EC:4.3.1.19] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Threo-3-hydroxyaspartate ammonia-lyase (EC:4.3.1.16)
serine/threonine dehydratase n=1 Tax=Fischerella muscicola RepID=UPI0002EEAEAD
13_1_40cm_3_scaffold_1546_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1066..1596
DNA (531bp) protein (177aa)
5'-nucleotidase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QN53_9DELT
5'-nucleotidase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative 5`-nucleotidase
13_1_40cm_3_scaffold_1546_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(1688..2383)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJX6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67559.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_3_scaffold_1546_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2344..3066)
DNA (723bp) protein (241aa)
Ferric reductase domain protein transmembrane component, N-terminal domain n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PH5_SOLUE
ferric reductase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ferric reductase domain-containing protein
13_1_40cm_3_scaffold_1546_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3103..4074)
DNA (972bp) protein (324aa)
Sulfoxide reductase catalytic subunit YedY n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RF35_9RHOO
Putative sulfite oxidase subunit YedY; K07147 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
molybdopterin binding oxidoreductase protein
13_1_40cm_3_scaffold_1546_6
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4064..4741)
DNA (678bp) protein (226aa)
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Moorea producens 3L RepID=F4XP08_9CYAN
Glycosyltransferase involved in cell wall biogenesis {ECO:0000313|EMBL:EGJ33779.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea prod
glycosyl transferase family protein
13_1_40cm_3_scaffold_1546_7
unknown

Not on your lists

comp(5096..5401)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_3_scaffold_1546_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

5727..6455
DNA (729bp) protein (243aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6T2_NOVAD
response regulator/sensory box histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_40cm_3_scaffold_1546_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

6501..8024
DNA (1524bp) protein (508aa)
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Fis family transcriptional regulator id=12555999 bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
13_1_40cm_3_scaffold_1546_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

8285..9817
DNA (1533bp) protein (511aa)
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=3866438 bin=GWC2_Deltaproteobacteria_66_88 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria rbh
Fis family transcriptional regulator
13_1_40cm_3_scaffold_1546_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

9820..10302
DNA (483bp) protein (161aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_40cm_3_scaffold_1546_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

10311..10727
DNA (417bp) protein (139aa)
Glycosyl transferase, group 1 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying 12 items

View Taxonomy