ggKbase home page

13_1_40cm_3_scaffold_18748

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_18748_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1..762
DNA (762bp) protein (254aa)
transketolase
Transketolase {ECO:0000313|EMBL:AHG89069.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Transketolase (TK) id=4962574 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
13_1_40cm_3_scaffold_18748_2
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

969..1496
DNA (528bp) protein (176aa)
ssuE; NAD(P)H-dependent FMN reductase, sulfate starvation-induced protein (EC:1.5.1.29)
NAD(P)H-dependent FMN reductase, sulfate starvation-induced protein {ECO:0000313|EMBL:CBJ38592.1}; EC=1.5.1.29 {ECO:0000313|EMBL:CBJ38592.1};; TaxID=859655 species="Bacteria; Proteobacteria; Betaprote
NAD(P)H-dependent FMN reductase, sulfate starvation-induced protein n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8N4U0_RALSL
13_1_40cm_3_scaffold_18748_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1493..2449
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F901_ACIC5
hypothetical protein
Glutathione synthase/ribosomal protein S6 modification enzyme (Glutaminyl transferase) {ECO:0000313|EMBL:CDM64421.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrino
13_1_40cm_3_scaffold_18748_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2449..3447
DNA (999bp) protein (333aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase {ECO:0000313|EMBL:CDM64422.1}; EC=1.14.14.5 {ECO:0000313|EMBL:CDM64422.1};; TaxID=454194 species="Bacteria;
ssuD; alkanesulfonate monooxygenase (EC:1.14.14.5)
Alkanesulfonate monooxygenase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QP10_9CYAN
13_1_40cm_3_scaffold_18748_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3558..4466)
DNA (909bp) protein (303aa)
hemY2; hypothetical protein; K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
HemY2 protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G3I1_SORC5
hemY2; hypothetical protein
13_1_40cm_3_scaffold_18748_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(4463..5203)
DNA (741bp) protein (247aa)
ferrochelatase (EC:4.99.1.1)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
Ferrochelatase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7A1_SPHTD
13_1_40cm_3_scaffold_18748_7
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(5200..5343)
DNA (144bp) protein (48aa)
ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1] Tax=RBG_16_Chloroflexi_54_18_curated
13_1_40cm_3_scaffold_18748_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5333..6265)
DNA (933bp) protein (311aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL2_9BACT
13_1_40cm_3_scaffold_18748_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6330..7394)
DNA (1065bp) protein (355aa)
cld2; chlorite dismutase (EC:1.13.11.49); K09162 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cld2; chlorite dismutase (EC:1.13.11.49)
chlorite dismutase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC35
13_1_40cm_3_scaffold_18748_10
unknown

Not on your lists

comp(7404..7544)
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_3_scaffold_18748_11
unknown

Not on your lists

comp(7541..7708)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_3_scaffold_18748_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7716..8522)
DNA (807bp) protein (269aa)
ctaB; protoheme IX farnesyltransferase (Heme O synthase) (Heme B farnesyltransferase) (EC:2.5.1.-) Tax=GWC2_Gemmatimonadetes_71_10_curated
ctaB; protoheme IX farnesyltransferase (Heme O synthase) (Heme B farnesyltransferase) (EC:2.5.1.-) id=14429801 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
protoheme IX farnesyltransferase
13_1_40cm_3_scaffold_18748_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8561..8860)
DNA (300bp) protein (100aa)
caa(3)-type oxidase, subunit IV Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Caa(3)-type oxidase, subunit IV id=1881831 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_3_scaffold_18748_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8871..9047)
DNA (177bp) protein (59aa)
ctaE; putative transmembrane cytochrome oxidase subunit; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Cytochrome c oxidase subunit III n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B5D3_HERA2
cytochrome c oxidase subunit III
Displaying 14 items

View Taxonomy