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13_1_40cm_3_scaffold_1930

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1930_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2..1828)
DNA (1827bp) protein (609aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
Multi-sensor hybrid histidine kinase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NL60_ROSCS
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_3_scaffold_1930_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1873..3384)
DNA (1512bp) protein (504aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Aldehyde dehydrogenase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L5X5_9BACT
aldehyde dehydrogenase
13_1_40cm_3_scaffold_1930_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

3605..4003
DNA (399bp) protein (133aa)
two-component hybrid histidine kinase (EC:2.7.3.-)
Two-component hybrid histidine kinase n=1 Tax=Sorangium cellulosum (strain So ce56) PF1_SORC5">RepID=A9EPF1_SORC5
response regulator receiver sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_3_scaffold_1930_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4084..4365
DNA (282bp) protein (94aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_3_scaffold_1930_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(4662..6089)
DNA (1428bp) protein (476aa)
Peptidase M28 n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR4_9BACT rbh
peptidase M28 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
peptidase M28
13_1_40cm_3_scaffold_1930_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6212..7249)
DNA (1038bp) protein (346aa)
id=12555467 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
id=12555467 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_1930_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7303..8139)
DNA (837bp) protein (279aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12555468 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative integral membrane protein
13_1_40cm_3_scaffold_1930_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8136..9092)
DNA (957bp) protein (319aa)
ABC transporter-like protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ABC transporter-like protein id=12555469 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
ABC transporter-like protein
13_1_40cm_3_scaffold_1930_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(9089..9832)
DNA (744bp) protein (248aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12555470 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_3_scaffold_1930_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10918..11490)
DNA (573bp) protein (191aa)
Metal dependent phosphohydrolase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WTK7_KYRT2
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
metal dependent phosphohydrolase
13_1_40cm_3_scaffold_1930_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11481..12398)
DNA (918bp) protein (306aa)
gltS; sodium/glutamate symport carrier protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
sodium/glutamate symporter; K03312 glutamate:Na+ symporter, ESS family id=24489649 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Rhodanobacter spathiphylli genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
sodium:glutamate symporter
13_1_40cm_3_scaffold_1930_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12716..14227
DNA (1512bp) protein (504aa)
amino acid transporter n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B54BD9 rbh
amino acid permease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
amino acid permease
13_1_40cm_3_scaffold_1930_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(14183..14653)
DNA (471bp) protein (157aa)
Hydrolase, NUDIX family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3W2_ACIC5
hydrolase, NUDIX family Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
NUDIX family hydrolase
13_1_40cm_3_scaffold_1930_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14687..15100)
DNA (414bp) protein (138aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q093R0_STIAD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
Displaying 14 items

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