ggKbase home page

13_1_40cm_3_scaffold_2392

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2392_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

140..436
DNA (297bp) protein (99aa)
integral membrane sensor signal transduction histidine kinase; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCV8_ANADF
response regulator receiver sensor signal transduction histidine kinase
13_1_40cm_3_scaffold_2392_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

638..1159
DNA (522bp) protein (174aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUD6_KORVE
two component transcriptional regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
two component transcriptional regulator
13_1_40cm_3_scaffold_2392_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

1260..1979
DNA (720bp) protein (240aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT25_KORVE
two component LuxR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
LuxR family transcriptional regulator
13_1_40cm_3_scaffold_2392_4
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

Not on your lists

2131..3933
DNA (1803bp) protein (601aa)
Putative uncharacterized protein n=1 Tax=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) RepID=A1S5G8_SHEAM
hypothetical protein Tax=RBG_13_Chloroflexi_48_10_curated
hypothetical protein
13_1_40cm_3_scaffold_2392_5
unknown

Not on your lists

comp(3984..4442)
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_3_scaffold_2392_6
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4656..5273)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Oceanobacillus kimchii RepID=UPI00034A1A4E
Uncharacterized protein {ECO:0000313|EMBL:ETZ22709.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
hypothetical protein
13_1_40cm_3_scaffold_2392_7
unknown

Not on your lists

5722..6330
DNA (609bp) protein (203aa)

This feature has no annotations

13_1_40cm_3_scaffold_2392_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7396..7911)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BRL6_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
toxin-antitoxin system, HicB family
13_1_40cm_3_scaffold_2392_9

Not on your lists

8448..9086
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIP3_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY89271.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
TonB-dependent receptor, plug
Displaying 9 items

View Taxonomy