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13_1_40cm_3_scaffold_2490

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2490_1
unknown

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1..630
-----------------
DNA (630bp)
protein (210aa)

This feature has no annotations

13_1_40cm_3_scaffold_2490_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(519..1709)
-----------------
DNA (1191bp)
protein (397aa)
oxidoreductase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036B1E39 rbh
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABJ88639.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" s
13_1_40cm_3_scaffold_2490_3
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1828..2898)
-----------------
DNA (1071bp)
protein (357aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R045_ISOPI
xylose isomerase domain-containing protein
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:ADV61163.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;"
13_1_40cm_3_scaffold_2490_4
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3213..4427)
-----------------
DNA (1215bp)
protein (405aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B47C25 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL86471.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 /
13_1_40cm_3_scaffold_2490_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(4427..6256)
-----------------
DNA (1830bp)
protein (610aa)
Pyrrolo-quinoline quinone n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NQ4_SOLUE
pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ABJ88716.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" sourc
13_1_40cm_3_scaffold_2490_6
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(6530..7036)
-----------------
DNA (507bp)
protein (169aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UYD8_TERSS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV82026.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA
13_1_40cm_3_scaffold_2490_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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7271..8329
-----------------
DNA (1059bp)
protein (353aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NP9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88721.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_3_scaffold_2490_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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8326..9456
-----------------
DNA (1131bp)
protein (377aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TX1_SOLUE
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ABJ86899.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_3_scaffold_2490_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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9821..10513
-----------------
DNA (693bp)
protein (231aa)
Putative hydrolase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZZN4_9ACTN rbh
putative hydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
putative hydrolase
13_1_40cm_3_scaffold_2490_10

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comp(10650..11693)
-----------------
DNA (1044bp)
protein (348aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium CSLD10 RepID=G4WVW3_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AEQ20565.1}; TaxID=1091573 species="Bacteria; environmental samples.;" source="uncultured bacterium CSLD10.;"
hypothetical protein
13_1_40cm_3_scaffold_2490_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(11700..12365)
-----------------
DNA (666bp)
protein (222aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI000378148C
serine/threonine protein kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
adenylate cyclase
13_1_40cm_3_scaffold_2490_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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12440..13147
-----------------
DNA (708bp)
protein (236aa)
h16_A1818; response regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
winged helix family two component transcriptional regulator; K07775 two-component system, OmpR family, response regulator ResD id=12554522 bin=CNBR_ACIDO species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
two-component response regulator
13_1_40cm_3_scaffold_2490_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(13323..14807)
-----------------
DNA (1485bp)
protein (495aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
integral membrane sensor signal transduction histidine kinase id=12554523 bin=CNBR_ACIDO species=Streptomyces clavuligerus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Displaying 13 items

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